Vigna radiata (mung bean): 106757804
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Entry
106757804 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106757804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106757804
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106757804
Spliceosome [BR:
vra03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106757804
Complex B
106757804
Complex C
U2 SnRNP specific factors
106757804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106757804
NCBI-ProteinID:
XP_014496089
UniProt:
A0A1S3TQQ5
LinkDB
All DBs
Position
3:7990819..7994935
Genome browser
AA seq
766 aa
AA seq
DB search
MSKRKFGFEGFGINRQSTYSFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYADNNNDE
GNKNSNDDDEIDPLDAFMEGIHEEMKAAPPPKPKEKAEDRYRDDDDDPMESFLKAKKDLG
LTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIIIDKKKIEPIPALDHSSIDYE
PFNKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKAFEDCGFPSQIMNAIKKQ
GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELEKEEGPIGVI
CAPTRELAHQIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML
KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLARE
ILTDPIRVTVGEVGMANEDITQVVCVIPSDTEKLPWLLEKLPEMIDQGDTLVFASKKATV
DEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVV
NFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSVELMD
LAMKDGRFRSKRDARKGGGKKGRGRGGGGGRRGVRGVDFGLGIGYNPESNNAPSNPVPTR
SAAVNSLRTGMMSQFRNNFVAASSNSQNQGFGNNTSMAANKRPALPGFVSGGSIGGDVNT
YQHTTSPSPASSVVNSSTQGSGVNSGQKSMNSSKPKERRRPSGWDR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaagttcggattcgaaggcttcggcataaaccgccaatcgacctacagc
ttcgagagatcccaggctcctcagcgactctacgtccctccttcctcccgtcacggccac
gacaactacgaggacaccgacctcgacaacattgactacgccgacaacaacaacgacgaa
gggaacaagaacagcaacgatgacgacgaaattgaccctctcgacgccttcatggagggg
attcacgaggagatgaaggcggcgccgccacccaagccgaaggagaaggctgaggaccgg
taccgggacgacgacgacgaccccatggagagctttctgaaggcaaagaaggatttaggg
ctgactctcgcttccgaggcgctgcacgctgggtacgattctgatgaggaggtttatgct
gctgccaaagccgtggacgctggtatgatcgagtatgattccgacgataaccctattatt
attgacaagaagaaaattgagcccattcctgctctcgatcactcttccattgactacgaa
cccttcaataaggatttttatgaggagacaccttcaatatcaggtatgagtgagcaggac
gtaagcgaataccggaagagtttggctattcgggtatctggttttgatgttcccaagcca
ataaaggcttttgaggactgtggatttccgtctcagattatgaatgctataaaaaaacaa
gggtatgagaagccgacatctatacaatgtcaggctttgccggttgtgctttccggcagg
gatattattggtatagctaaaactggttctggtaaaacggcttcttttgtgcttcctatg
attgtgcatatcatggatcagcctgagcttgagaaggaagaggggcctataggggtgata
tgtgcacctacccgagaattggctcatcagatatacctggaggccaagaaattcgcaaaa
gcgtatggggtacgtgtatctgctgtctatggtggaatgtcaaaacttgaacagttcaaa
gaactcaaagctggatgtgagatagttgttgctacccctggcagattgatagacatgctg
aaaatgaaggcattgacaatgacgagagcaacttacctggtgcttgatgaggcggatcga
atgtttgatctggggtttgaacctcaagtaaggtccattgttgggcagattaggccagac
cgtcaaacattactcttttctgcaacaatgcctcgtaaagttgaaaagttggccagggaa
atccttaccgatcctatcagagtaactgttggagaggtggggatggcaaatgaagatatt
actcaagttgtttgtgtgattccttctgatactgaaaagttgccttggcttctggaaaag
ctacctgaaatgattgatcaaggtgatactctagtttttgcttcaaagaaggccactgtg
gatgaaatagaatcgcagttggctcaaagaggctttaaagttgctgccctgcatggtgat
aaagatcaagcttctcggatggatattttgcagaagtttaaatccggtctctaccatgtg
ctcattgcaactgatgttgcagcccggggtcttgacatcaagtcaattaagtcagtggta
aactttgatattgcaaaggatatggacatgcatgttcatcgcattggaagaacaggtcgt
gctggtgacaaggatggggttgcgtacactcttataactcagaaagaagcacgatttgct
ggtgaattggtcaatagcttagttgctgctggtcagaatgtgtccgtggagttgatggat
cttgcgatgaaggatgggagattcaggtcgaaacgtgatgcaagaaaaggaggtgggaaa
aaaggcagaggtagaggtggtggcggaggtcgccgtggtgtgcgtggagtggattttggc
ttgggcattggatataatcccgaatctaacaacgcaccatctaacccagttcctactcga
tctgccgccgtaaattctctgcggactggaatgatgtcacaatttaggaacaactttgtt
gctgcttcatcgaactctcagaatcaaggattcggtaacaatacaagcatggctgctaat
aagagaccggcactccctggttttgtatctggtggatcaattggtggtgacgtgaatacg
taccagcacactacttcacccagtcctgcttcgtccgtggtaaattccagcactcaaggt
tctggagtaaattctggtcagaagagcatgaatagttctaaacccaaagagaggcggagg
ccatcaggttgggatagataa
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