KEGG   Vigna radiata (mung bean): 106758045
Entry
106758045         CDS       T04126                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
vra  Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:vra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vra03009]
    106758045
Ribosome biogenesis [BR:vra03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    106758045
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML NBCH_WD40 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 WDR54 PROPPIN Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_2nd GCN5L1 LZ3wCH
Other DBs
NCBI-GeneID: 106758045
NCBI-ProteinID: XP_014496427
UniProt: A0A1S3TRT3
LinkDB
Position
4:18594492..18600596
AA seq 448 aa
MEVVLASSSLDGGIGCWDLHTGAEQLRYKSCSSPSHGLVAVGPRFIASSQLREPSATSGS
VLFWSWSKPQVEVKSFPAEPIKPLASNHLGTFIAGGALSGDIYLWEVETGRLLKKWHAHL
GAVTCLVFSEDDSLLVSGSRDGTVRVWSLFMIFDEFRGQLANNLYEYSFSGHTLCVTDVV
IGNGGCNAIIVSASEDKTCKVWSLSRGTLLRNIVFPSHIDSIALDPAEHVFYAGSRDGKI
FIAALSTESVASNNCGMHIIGSFSNQSKTVTCLAYSMSGNLLISGSEDGMVRVWDARTRT
NVRVFKHAKGPVNNILVVRRENSSNHISSNVQTSSRKQGANLPPPLEKYANSIHEDSDMN
TTITLGGDRSSVDLSYLSSHVISNYVKELQHQGSAAASEMETEKLKHDYQRAMQMANQWK
KMYENLNKFCVKELLDGSQARTLDENHN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtctctagacggcggaatagggtgctgggatcttcac
accggcgcggagcagctccgctataaatcttgctcctccccttctcacggccttgtcgcc
gtcggtcctcgcttcatcgcctcctctcagcttcgagaaccttcagcaacatctggttcc
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagctttcccgctgaacct
attaagccccttgcttctaatcacctgggaaccttcattgctggtggagctttgtctggg
gatatttacttgtgggaagttgaaaccggtagattgcttaagaagtggcatgcacattta
ggggcggttacttgtctggttttttctgaagatgactcgctgttggtttctggttctcga
gatggaaccgtaagagtttggtctctcttcatgatattcgatgaattcagaggtcagctg
gctaataatctttatgagtatagtttttccgggcacaccctgtgtgtgactgatgttgtg
attggtaatggagggtgcaatgcaattattgtgtcagcttctgaggataaaacttgcaag
gtatggagcttatcgaggggaacactactaagaaatatagtattcccttcacatattgat
tccattgcattggatccagctgaacatgtcttttatgctggcagtagagatggaaaaata
tttattgcggcacttagcactgaaagcgttgctagtaataattgtgggatgcatatcatt
ggttctttttctaaccagagcaagacagttacttgcttagcatatagcatgagtgggaat
ttgttaatatccgggtcagaggatggaatggttcgtgtttgggatgcaagaactcgaacc
aatgtccgcgtgttcaaacatgctaaagggcctgtaaataatattcttgttgttagacga
gaaaactcaagtaatcacatatcttctaatgtacaaacatcatcaagaaagcaaggggct
aatttaccccctccattggaaaaatatgcaaattccatacatgaagactcagatatgaac
actacgatcactcttgggggtgacaggagttccgtagatctttcatacctcagttctcat
gtgatatctaattacgttaaggaacttcagcatcaaggatcagctgctgcttctgaaatg
gaaacggagaaactaaaacatgattaccaaagggcaatgcaaatggctaaccaatggaag
aaaatgtatgaaaacttaaataaattttgtgtgaaagaactgttggatggtagtcaagcc
agaaccttagatgaaaatcacaattaa

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