Vigna radiata (mung bean): 106759988
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Entry
106759988 CDS
T04126
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03022
Basal transcription factors
vra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106759988
09124 Replication and repair
03420 Nucleotide excision repair
106759988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106759988
03400 DNA repair and recombination proteins [BR:
vra03400
]
106759988
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106759988
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106759988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
106759988
NCBI-ProteinID:
XP_014498896
UniProt:
A0A1S3TYR0
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Position
5:13572062..13577257
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AA seq
292 aa
AA seq
DB search
MPSAPSKIYADDVSLLVVTLDTNPFFWATFPFPFAEFLSQVLAFLNSILLLGQLNQVIVI
ATGCNSCAYVYDSSSERNHGATTGTMPALYSNLLHNINEFLARDRQLDALRKTGTVPSSL
LSGSLSMALCYIQRAFRLGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQRSMVPIDSC
YIGSNNSAFLQQASYITSGIYYKPPQLEGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRA
SCFCHKRTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAANRKRKA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcaccttcgaaaatctacgcagacgatgtgagccttctggttgtgacgcta
gacaccaatcctttcttctgggccactttccccttccccttcgccgagttcctctcccaa
gtactcgcctttctcaactcgatcctgctcctcggccagctcaaccaggtcatcgtcatc
gccactggatgcaactcctgcgcctatgtgtacgattcctcttccgaacggaaccacggt
gccaccaccggcacaatgcccgcgctttattccaacttactccacaatatcaacgagttt
ctcgctagggaccggcaattagacgctcttcgaaaaacgggaaccgtgccttcttcgctc
ctatcgggctccttgtccatggcgctttgttatatacagagagcttttcgcttaggacct
atgcctccgcagcctcggattttatgtttgcaaggcgctgccgatggaccagaacagtat
gtggcaatcatgaatgcaatattctctgcacagcgttctatggttcctatagattcttgt
tatattggctccaacaactctgcattcctccagcaggcttcttacataactagtggaata
tattacaagcctcctcaattggaagggctttatcaatatctttcaacagtatttgcaact
gatttacattctcgcgcatttttaaggcttcctaaatctgtgggtgtggattttcgtgca
tcgtgcttctgccataagcgaacaattgacatgggcttcgtatgttctgtatgcttgtcc
attttctgtgagcatcatgataagtgttcaacctgtgggtctgtatttggtcaagctcaa
ctagatgcttcagcagccaacaggaaaagaaaggcgtga
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