Vigna radiata (mung bean): 106760628
Help
Entry
106760628 CDS
T04126
Name
(RefSeq) transcription elongation factor SPT6-like isoform X2
KO
K11292
transcription elongation factor SPT6
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106760628
03036 Chromosome and associated proteins [BR:
vra03036
]
106760628
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106760628
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106760628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
Tex_central_region
Tex_YqgF
Tex_N
DUF4691
Motif
Other DBs
NCBI-GeneID:
106760628
NCBI-ProteinID:
XP_014499532
UniProt:
A0A1S3U0J1
LinkDB
All DBs
Position
5:32806168..32817510
Genome browser
AA seq
1628 aa
AA seq
DB search
MERGRRENHRHQEQEKIRTKGQSSEPDPDYEEDEEDLDAFDTDVFIVDDPEYEEDGEEES
RKQAQKKKKRKSLGTIVLDDEDLELIRENRRINQEASRDGKLKRLRKAGVDSALMEYTSN
DEGSLFDNTSEDDMADFIVDEEVVILKKPDFLREQKLKGIKHSPSLSKGAKRSFGKEGRL
EKHIENDQVQSVDPNKYKSFIPADTYVPGEDHDIDIPERMQIVQDTVGSPIDEMSLEEES
SWILGQLASNINPLFSEANSCRLVDTAKRGDIINFLELHHKMKYDIPFIAMYRKEQCLSL
LEDPKLNDESENISLKMHKMLWIIQELDKKWWLLQKRKNLLMEYYNKHFEEKLQLSFLVE
ESSFHAQMFDSITNMLKNAETETEIDDIDRRFNLYFPPVEEPFDCGFRRPMTKSYYSNCY
KAGLGSLSSKFGDPEKFSSSVTLSQVGTNKEEDSEESPEQIASMYKCETFQTSEAVLNGA
RHMAAVMLSSEIPFRKYIRSIFMDKALVSTNPTLEGNIAIDSFHEFSGVKWLRDKPLPKF
EDSQWLLIKKAEEEKLLQVKIHLPDHTMNELTMTCNDAYLKDSEGVSTRLWNEQRKLILK
DVISNFLLPSMEKEARVLLNAKAKNHVLMKYAVQLWNRVSVAPYLKDVSDTVQQKGVMAC
CWGNGKPGTTFVMLDSGGELVDVMHARSLALRSQQIIDQQSRKNDQQCILRFLTTYQPEV
IVIGASNASCLKLREDINEIISMISEHNFRNSNKGMNVLPTVVLGETGLPHIYEDSEIST
RQLPRQDGIVRRAVALGRYLLNPLAMVATLCGEENEIVYWKVTPLEKFLTSDEKLKMIEW
VMTDVTNQVGIDINLAVRHDWLLASLQFVSGLGPKKANILCKQLLGGADVRNRRDFAKFG
LNTNKIFCNAVGFLCVSCDVADNTLDRTRIHPESYNLSEELARAVYRKLVQENPEADVSE
ASAIECIQNDPNLLKEFDLNEYADRLEIENGENRRVTLFDIKMELLHGFKDPRRPYTEPT
EDEEFCMITGETGDVLVEGKRVEATVRKVLPQQAFCVLHSGMDAVLFKDDFSDGTENISL
SEKLREGVVLACKIKLVNKSRCQVNLTCKVSELKNDGDQSFHNMDPYYHEGKTISMNQLE
GTEEVELGNKHFLPRMISHPNFQNINADQAKQFLADHEVGEYIFHPSTRGLYYLTLSLKI
CNSVYVHKDIVEGGKGSKLKTLAELGETLKIGEETFENINQVIELYVNPLVVHLKAMLNF
RKFKNGTKAEVDERLKHEKEEYPNRIVYGFGVSYEHPGTFILSYIRSTNPHHEFVAIHPK
GFKFRKQIFENIELLVAYFQNHINDNVALAKSSIKVGSVSDSLSGGWRNSVGQHSESEAY
NDHRGGRGPQRGRGDRGRGDRGRGDRGRGDRGRGFGPRSGSRDDSADDSFGGNSWEVRGS
GEGNGGRQGRGRGRGRGRGGRGSQGDTNDGGFEPGQNEGRERGRGRGRGRGRGRRGNQGS
DDQGRGGWGRNNHGSGNRADGEYSDAYKGGDWGQGSNQGRGWRGSKGNNDQGCSDWGEGT
DQGRGWRGSQGNGQGCSGWGGNSFNEERNEGKKDWGQGNGGSGSENLGWGKNAGPSGGGG
GGGWGKSW
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggagagggggagaagagagaaccatcgccaccaagaacaagagaaaatccgaacgaaa
ggacaaagttcagaacctgatcctgattacgaagaagacgaggaagacttggatgctttt
gatactgatgtgtttattgttgacgaccccgaatatgaagaagatggtgaagaagaaagt
cgaaaacaagcacaaaagaagaaaaagaggaaatcattgggaaccattgttcttgatgac
gaggatcttgagttgattcgcgagaacaggcgcatcaatcaagaagcatcgagagatgga
aaattgaagaggcttagaaaggctggtgtagactctgcactgatggaatacacttctaat
gacgaaggatcactctttgataatacttctgaagatgacatggcagatttcatagtggat
gaagaggttgtcatcctcaagaagccagattttctcagagaacaaaagttgaaaggcata
aaacattcaccttcactttcaaaaggagccaaacgtagttttggcaaggaaggtcggctg
gaaaagcacattgagaatgatcaagttcagtctgttgatcctaacaagtataaatcgttc
atccctgctgacacgtatgtacctggagaggatcatgatatagatatacctgagaggatg
cagatagttcaggacactgtaggatctccaattgacgaaatgagtctagaagaagaaagt
tcttggatactaggtcaactagcatctaacataaatccattatttagtgaggctaattcg
tgcagactagtcgatacagccaaaaggggagatattattaatttcttagaattacatcat
aaaatgaaatatgatattccttttattgcgatgtaccggaaggaacaatgccttagtctt
ctggaagatccaaaattgaatgacgaatctgaaaatatatcgctgaaaatgcacaagatg
ctctggataatccaagaattagataaaaagtggtggcttcttcagaagcggaagaacctg
ctcatggaatactataacaaacattttgaggaaaaacttcaactgtctttccttgttgaa
gaatccagttttcatgcgcagatgtttgattcaatcaccaatatgctaaaaaatgctgaa
acagagactgagattgatgatatcgataggaggtttaatttgtatttccccccagtcgag
gagccttttgactgcggttttagaagacctatgacgaaatcatactattctaactgctat
aaggcaggtcttgggtcactttcaagcaaatttggcgatcctgagaaattcagttcttca
gttactctttctcaagtgggaacaaacaaagaagaagattcagaggaatctccagagcaa
atagcttcaatgtacaagtgtgaaacctttcaaacttcagaagctgtacttaacggggct
aggcacatggcagcagtgatgctaagcagtgagattcctttcaggaaatatatccgcagc
atatttatggacaaggctttagtttcaactaaccctacactggaaggaaatatagctata
gattcttttcatgaattttctggtgtgaagtggttgcgggacaaacctctcccgaagttt
gaggattcccagtggctattaattaagaaggctgaagaagagaagcttcttcaagttaaa
atacatttgcctgatcataccatgaatgaattgacaatgacctgtaatgatgcctatctc
aaagatagtgaaggggtatctactagactttggaatgaacagcgtaaattaatcctgaag
gatgtcatttccaatttccttttgccttctatggagaaggaagcacgggtattgttaaat
gccaaggctaaaaaccatgtattaatgaagtatgcagtgcaattatggaacagggtttct
gtggcaccgtatttgaaagatgtgagtgacactgtacagcagaagggagtaatggcttgc
tgttggggaaatggaaagccaggtacaacgtttgtcatgttggactctggaggagaattg
gttgatgtgatgcatgctcggtcgcttgcactacgatctcaacaaatcattgaccagcag
agcaggaaaaatgatcaacagtgtatcctcaggttcctaacgacatatcaaccagaagtt
atcgtaataggagcaagtaatgcgtcttgtttgaagttaagggaggacattaacgagatt
atttccatgatctcagagcacaattttcgaaactccaataaaggaatgaacgtactacct
acagttgtattaggggagacaggcttgcctcatatttacgaagattcagaaatttccacg
aggcagcttcctagacaagacggcattgtcaggagagctgtggctcttggacgttacctt
ctaaacccactggctatggtggcaacactatgtggagaggaaaatgagattgtctattgg
aaggtgacccccctggagaaattcctaacaagtgatgagaagttgaagatgattgaatgg
gtcatgacagatgttacaaatcaagtaggcatagacataaatttggcagtcagacatgac
tggctgttggcctctttgcagtttgtttctggtcttggacccaagaaagccaatattttg
tgtaaacaattgcttggaggtgccgatgtgagaaatagaagggattttgctaaatttggg
ctgaacacaaacaagattttttgcaatgctgttggctttttatgtgtttcttgcgatgta
gcagacaatactcttgaccgtaccagaattcatccagagtcgtacaatctttcagaggaa
ttagcaagggctgtttacaggaaacttgttcaggaaaatccagaagctgatgtttccgaa
gcgagtgcaattgaatgcattcaaaatgacccaaacctgctaaaagaatttgatttaaat
gagtatgctgatagattggaaatagaaaatggtgaaaacagaagggttaccctttttgac
ataaagatggaattactccatggttttaaagatcctaggaggccttatacggagccaact
gaagatgaggagttttgcatgataactggagaaactggggatgtgctagtagaaggaaaa
agagttgaggcaacagttcgtaaggtgcttcctcaacaagcattttgtgtcctacactcc
ggaatggatgcagtactttttaaggatgacttttcagatggaactgagaatatctcttta
tcagaaaaattgcgtgaaggtgttgtgcttgcatgcaagatcaaattagttaataagagc
agatgccaggtaaatctgacttgtaaggtgagtgagttgaagaatgatggcgaccaaagt
ttccataacatggatccatattaccatgaaggaaagaccatttcaatgaatcaattggag
ggaacagaagaggtggagcttggaaataaacatttcttgcccaggatgatttctcaccct
aattttcaaaatataaatgcagatcaagcaaaacagttccttgcagatcacgaagttggg
gaatatatctttcacccaagtacaaggggtctatattatttgaccctctctcttaaaatt
tgtaatagtgtttatgtacacaaagacatcgtggaaggtggaaagggtagtaaattaaaa
accttggcagaactcggagagacattaaaaataggagaggaaacatttgagaacataaat
caggttattgaactatatgtcaatccactagtagttcatctgaaagctatgcttaatttt
agaaaatttaagaatggcacaaaagctgaggttgatgaacgcttaaagcatgagaaggaa
gaatatccaaacaggatagtatatggctttggcgtttcgtatgaacatcctggcactttc
atcttgtcttacattagaagtacaaatccacatcatgagtttgtggctatccatccaaaa
ggattcaagttcaggaagcaaattttcgaaaatattgagctgctggtggcatattttcaa
aatcatatcaatgataatgttgcgctagcaaaatccagcataaaagttggttcagttagt
gattccttgtctggagggtggagaaacagtgtaggtcaacactccgaatcagaagcttac
aatgatcatcggggtggtcgtggtcctcaacgtggccgtggagaccgtggtcgtggagac
cgtggccgtggagaccgtggccgtggagaccgtggacgtggatttggccctaggtctggc
tctcgtgatgatagtgctgatgattcctttggaggtaatagttgggaagtgaggggttct
ggcgaaggcaatggtgggagacaaggtaggggtaggggtaggggtaggggaagaggaggt
agaggaagccaaggtgatacaaacgatggtggttttgaacctggtcagaatgaaggaaga
gagagaggaagaggaagagggagaggacgagggagaggaaggaggggaaaccaaggtagt
gatgaccaaggacgtggtggttggggtagaaataaccatggtagtgggaaccgtgcagat
ggtgagtacagtgatgcttacaagggtggtgattggggacaaggttctaatcagggaaga
ggatggagaggaagtaaaggcaataatgaccaaggatgtagtgattggggagaaggtact
gatcaaggaagaggatggagaggaagccaaggcaatggccaaggatgcagtggttggggt
gggaatagcttcaatgaagagaggaacgaaggcaagaaagattggggacaaggtaatggt
ggatccggaagtgagaacttaggatgggggaagaatgcaggtccttccggtggtggtggt
ggaggtggatggggtaaaagttggtaa
DBGET
integrated database retrieval system
