Vigna radiata (mung bean): 106761133
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Entry
106761133 CDS
T04126
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03030
DNA replication
vra03410
Base excision repair
vra03420
Nucleotide excision repair
vra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106761133
03410 Base excision repair
106761133
03420 Nucleotide excision repair
106761133
03430 Mismatch repair
106761133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vra03032
]
106761133
03036 Chromosome and associated proteins [BR:
vra03036
]
106761133
03400 DNA repair and recombination proteins [BR:
vra03400
]
106761133
DNA replication proteins [BR:
vra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106761133
DNA Replication Termination Factors
ELG1-RFC complex
106761133
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106761133
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106761133
Check point factors
HRAD17(Rad24)-RFC complex
106761133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_16
DNAX_ATPase_lid
AAA_11
AAA_14
DUF815
AAA_5
AAA_30
RuvB_N
AAA_24
ATPase_2
bpMoxR
AAA_7
AAA_3
AAA_19
ResIII
nSTAND3
Gp44_lid
AAA_28
TniB
DUF3086
TIP49
Mg_chelatase
NB-ARC
AAA_25
AAA_18
Motif
Other DBs
NCBI-GeneID:
106761133
NCBI-ProteinID:
XP_014500132
UniProt:
A0A1S3U277
LinkDB
All DBs
Position
5:13389508..13396414
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AA seq
359 aa
AA seq
DB search
MTTHPMEIDSESDDQTNSAGENDILAADLTSLGKAIPWVEKYRPQSLDDVAAHRDIVDTI
DRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGPRFQNMILELNASDDRGIEVVRQQI
QDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII
PALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDDGLAALVRLSNGDMRKALNILQS
THMATHQITEEDVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALVDIIR
EVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAAS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccatcccatggaaatcgacagcgaaagcgatgaccagacaaactccgccggt
gaaaatgacatacttgccgcagaccttacttccctcggcaaggccattccgtgggttgaa
aaataccgccctcagtctctcgacgacgtcgccgctcaccgtgacattgttgataccatt
gataggctaactacagagaacagattgccgcatcttttattgtatggtcctcctggaacg
ggcaaaacatcaaccattctcgctgtggcacgcaaactatatggtccacgcttccaaaat
atgattttagagctcaatgcatcagatgacagaggaattgaggtcgtgaggcagcagatt
caagattttgctagcactcagagcttatcatttggtgttaagtcctctgtaaagctcgta
ttgttggatgaagcagatgccatgacaaaggatgcccaatttgcattacgtagagtgatt
gagaaatatacaaaaagcaccaggtttgctcttatctgtaatcatgtaaacaagattatt
cctgcacttcaatctagatgcactcggtttcgatttgcccctcttgacgctgtccatgtc
actgaaagactgaaacacgttattaaggctgaagggcttgatgttgaagacgatggctta
gcagcccttgttcggcttagcaatggtgatatgagaaaggctttaaatattcttcagtca
acacatatggctactcaccagataacagaagaagatgtttacctgtgcactggaaatcca
ttgcccaaagatattgagcaaatatcttactggcttctaaacgaacaatttgcagatagc
tttaaaagaatagatgagatgaagaccaggaaagggttggccctggttgatattatcaga
gaagtgatcatgtttgtttttaagattaagatgccttcagctgttcgagtacaattgatg
aatgatttggcagacatagagtacagattaagttttgggtgcaacgataagcttcagctt
ggatcggtcattgcttcttttacacgcgctagatctgcactggtagctgctgcctcatag
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