KEGG   Vigna radiata (mung bean): 106761133
Entry
106761133         CDS       T04126                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03030  DNA replication
vra03410  Base excision repair
vra03420  Nucleotide excision repair
vra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106761133
   03410 Base excision repair
    106761133
   03420 Nucleotide excision repair
    106761133
   03430 Mismatch repair
    106761133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vra03032]
    106761133
   03036 Chromosome and associated proteins [BR:vra03036]
    106761133
   03400 DNA repair and recombination proteins [BR:vra03400]
    106761133
DNA replication proteins [BR:vra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106761133
  DNA Replication Termination Factors
   ELG1-RFC complex
    106761133
Chromosome and associated proteins [BR:vra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106761133
DNA repair and recombination proteins [BR:vra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106761133
  Check point factors
   HRAD17(Rad24)-RFC complex
    106761133
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_16 DNAX_ATPase_lid AAA_11 AAA_14 DUF815 AAA_5 AAA_30 RuvB_N AAA_24 ATPase_2 bpMoxR AAA_7 AAA_3 AAA_19 ResIII nSTAND3 Gp44_lid AAA_28 TniB DUF3086 TIP49 Mg_chelatase NB-ARC AAA_25 AAA_18
Other DBs
NCBI-GeneID: 106761133
NCBI-ProteinID: XP_014500132
UniProt: A0A1S3U277
LinkDB
Position
5:13389508..13396414
AA seq 359 aa
MTTHPMEIDSESDDQTNSAGENDILAADLTSLGKAIPWVEKYRPQSLDDVAAHRDIVDTI
DRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGPRFQNMILELNASDDRGIEVVRQQI
QDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII
PALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDDGLAALVRLSNGDMRKALNILQS
THMATHQITEEDVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALVDIIR
EVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAAS
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgacgacccatcccatggaaatcgacagcgaaagcgatgaccagacaaactccgccggt
gaaaatgacatacttgccgcagaccttacttccctcggcaaggccattccgtgggttgaa
aaataccgccctcagtctctcgacgacgtcgccgctcaccgtgacattgttgataccatt
gataggctaactacagagaacagattgccgcatcttttattgtatggtcctcctggaacg
ggcaaaacatcaaccattctcgctgtggcacgcaaactatatggtccacgcttccaaaat
atgattttagagctcaatgcatcagatgacagaggaattgaggtcgtgaggcagcagatt
caagattttgctagcactcagagcttatcatttggtgttaagtcctctgtaaagctcgta
ttgttggatgaagcagatgccatgacaaaggatgcccaatttgcattacgtagagtgatt
gagaaatatacaaaaagcaccaggtttgctcttatctgtaatcatgtaaacaagattatt
cctgcacttcaatctagatgcactcggtttcgatttgcccctcttgacgctgtccatgtc
actgaaagactgaaacacgttattaaggctgaagggcttgatgttgaagacgatggctta
gcagcccttgttcggcttagcaatggtgatatgagaaaggctttaaatattcttcagtca
acacatatggctactcaccagataacagaagaagatgtttacctgtgcactggaaatcca
ttgcccaaagatattgagcaaatatcttactggcttctaaacgaacaatttgcagatagc
tttaaaagaatagatgagatgaagaccaggaaagggttggccctggttgatattatcaga
gaagtgatcatgtttgtttttaagattaagatgccttcagctgttcgagtacaattgatg
aatgatttggcagacatagagtacagattaagttttgggtgcaacgataagcttcagctt
ggatcggtcattgcttcttttacacgcgctagatctgcactggtagctgctgcctcatag

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