Vigna radiata (mung bean): 106761825
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Entry
106761825 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH12
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106761825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106761825
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106761825
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106761825
Complex C
U5 SnRNP specific factors
106761825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
106761825
NCBI-ProteinID:
XP_014500879
UniProt:
A0A1S3U4F9
LinkDB
All DBs
Position
5:30569059..30578032
Genome browser
AA seq
2184 aa
AA seq
DB search
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAY
RGRPVELDEKLEKAKNKKKKKDRDAAADAAVSVPSKRRRVQHDSVLSASDDGVYQPKTKE
TRAAYEAMLSVIQHQLGGQPLSIVSAAADEILAVLKNDSLKNTDKKKDIEKLLNPIPNHV
FDQLVSIGKLITDFQEATDVSNGNSAMDGEEGLDDDVGVAVEFEENEDDDEESDLDIVQD
DEEEEEDGVEQNGSAAMQMGGGIDDEDMEDGNEGMSLNVQDIDAYWLQRKISLAFEQQID
PQQCQKLAEEVLKILAEGDDREVESKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQD
QEERERIEEEMKGTELQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTGGDGDKER
DRGRRGLADRDGESGWLKGQRQMLDLDNIAFAQGGLFMAKKKCDLPDGSYRHLSKGYEEI
HVPALKAKALDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPT
GAGKTNVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDV
KVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR
GPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVP
LSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALG
KDTLGRFLKEDSASREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADG
HVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSY
GEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTY
LYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDL
GRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRV
PIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGW
AQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGEL
IRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVI
VEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIHVVSDKWLGSQTVLPV
SFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDN
VLVAAPTGSGKTICAEFAVLRNHQKGPDSVMRVVYVAPIEALAKERYRDWERKFGIGLKL
RVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQG
GPVLEVVVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPL
EIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNKKPALVFVPTRKHVRLTAVDLITYSGA
DSGEKPFLLRSPEELEPFLDKISDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFDAGWIQ
VCVLNSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKC
VILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYR
RLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCITIEDDMDLSPLNLGMIASYY
YISYTTIERFSSSVTSKTKMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENP
KVTDPHVKANALLQAHFSRQFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLT
MEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQDNPGKSIETVFDLLEMEDDERRELLGM
SDSQLLDIARFCNRFPNIDLSYEVLDSDNVRAGEDVTLLVTLERDLEGKTEIGPVDAPRY
PKAKEEGWWLVVGDTKTNLLLAIKRVSLQRKLKAKLEFAAPADTGRKSYALYFMCDSYLG
CDQEYGFTVDVKEADGDDEDSGRE
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacctaggtggaggtgcggaagcgcacgcacggttcaagcagtacgagtaccgt
gccaactccagcttggttctcaccaccgactctaggccacgcgacacgcatgagcccacc
ggtgagcccgagtctctctggggcaagattgaccccaagagcttcggcgaccgcgcctac
cggggccgacccgtggagctcgacgagaagcttgaaaaggcgaagaacaagaagaagaag
aaggaccgtgacgccgccgccgatgccgccgtctccgtcccttcaaagcggcgccgtgtt
cagcatgacagtgttctctctgcctccgacgacggcgtgtaccagcccaagacgaaggag
actcgcgcagcctatgaggccatgctcagtgtcatccagcaccagctcggcggccagccc
ctcagcattgtcagtgctgctgctgatgagatacttgctgtgcttaaaaacgatagtctt
aagaacacggacaagaagaaagatatagagaagcttttgaatcccatacctaaccatgtt
tttgaccagctagtttcgattgggaagttgattactgactttcaggaggctactgatgtt
tcgaatgggaattcggctatggatggtgaagaggggcttgatgatgatgttggtgttgct
gttgagtttgaggagaatgaagatgatgacgaggagagtgatttggatattgtgcaggat
gatgaagaagaggaggaggatggggtggagcagaatggttctgcggctatgcaaatgggg
ggtgggattgatgacgaggatatggaagatggtaatgaagggatgagtttgaatgtgcag
gatattgatgcgtattggcttcagaggaaaatctctctggctttcgagcagcagattgat
ccgcagcagtgccagaagctcgcggaggaggtgctcaagattctggctgagggtgacgac
agggaggtggagagcaaactcttgtttcacctcgagtttgataagttcagcctcattaag
tttttgcttaggaataggttgaagattgtgtggtgtacacggttggcaagggcacaggac
caggaggagagagagaggatcgaggaggagatgaagggaactgagttgcagccgattttg
gagcagttgcacgctacaagggcatccgcgaaggagaggcagaagaacttggagaagagt
ataagggaggaggctaggaggttgaaggatgacactggtggagatggggataaagagagg
gacaggggcaggaggggacttgctgatagagatggagagagtggatggttgaagggacag
cggcagatgcttgatcttgataacattgcttttgctcaaggtggtttattcatggctaag
aagaagtgtgacctgcctgatgggtcttataggcatcttagtaagggatatgaagagata
cacgtgcctgccttgaaagctaaagcgcttgatccaaatgagaagcttgtgaaaatttca
tctatgcctgattgggcacaaccggcttttaaaggaatgacacagttgaatagagtgcag
agcaaagtatatgagactgcactttttaagcccgataatcttctgctctgtgccccaact
ggagctggaaaaactaatgttgcagttctcactatacttcaacaaattgcacggcatagg
aatcctgaggatggctcgattgaccatagtgcttataaaattgtgtatgttgcacctatg
aaagctcttgttgctgaggtagttgggaatttgtccaatagattgcaggaatatgatgtt
aaagtcagggagctcagtggagaccagtcattaacccggcaacagatagaagagactcag
attatagtgacaacccctgagaagtgggatattatcacccgaaagtcgggagaccgaact
tatacacagcttgtaaaacttctaattattgatgagattcatctacttcatgacaacaga
ggacctgttcttgaaagtatcgttgctagaacagtaaggcaaattgaaaccacaaaggac
tatattcgtttggtgggactgtctgctactctccctaattatgaagatgttgcactgttc
ttgcgagttgatctgaagaagggtttgttttattttgataatagttacagacctgttcca
ctttctcagcagtatgttggaatcacggtgaagaagccacttcagaggttccagttgatg
aatgatatctgttatgagaaagttatggctgtggctgggaaacatcaggttcttatattt
gtacactctaggaaagaaactgccaaaactgctagagccatcagagatgctgcgctggga
aaggatactcttggtaggttccttaaagaagatagcgcaagccgtgagattcttcaaact
catactgatcttgtgaagagtaatgatcttaaagatcttctgccatatggttttgctatt
catcatgctggtatgaccaggacagatcgccagcttgttgaagatctttttgctgatgga
catgttcaagtattggtatcaactgcgacccttgcgtggggtgttaatctaccggcccat
acagtgattattaaaggaacacagatttataatcccgaaaagggggcctggactgaatta
agtcctcttgatgtgatgcagatgctgggtcgtgctggaaggccgcaatatgattcatac
ggtgagggaataattgttactggtcatagtgagttgcagtattacctctctcttatgaac
caacaacttcctattgaaagtcagtttgtgtccaagctggctgatcagctgaatgcagag
attgttcttggtactgtacaaaatgccagggaagcttgtaattggattggatatacttac
ttgtatgtccgcatgctgaggaatccttcattgtatggtatagcacctgacgtcctaaca
agggatataacattggaagagagaagggctgatttgatccatactgctgcaaccatcttg
gatagaaataatttggtgaagtatgataggaagagtggatactttcaggtcactgatcta
ggccgtattgctagctactactacataacacatggaaccatatcgacatataatgagcat
ttgaagcctacaatgggggacatagagctttgccgattgttctcattaagtgaagaattt
aagtatgtaacagtaaggcaggatgagaagatggagctagcaaaactcttggaccgtgtt
cccattcccatcaaggaaagtctggaagagccaagtgcaaagatcaatgttttactgcaa
gcatacatttcacaattaaagctagaaggactctcactgacatctgatatggtctttata
actcagagtgctggacgccttttacgggcactatttgagattgttttgaaacgtggctgg
gcacaattggctgagaaggctttgaacttgtgcaaaatggtgaccaagaggatgtggagt
gtccaaactcctcttcgtcaattcaatggaattccaagtgatttactaacgaaattggag
aagaaagatctggcttgggaaaggtattacgatttatcatcacaagagataggtgaactc
attcgtgcaccgaagatgggaaggacacttcataaatttatccatcagtttcctaaactg
aaccttgcagcacatgtccagccaattactaggacagttttgagagttgagctgacgata
actccggattttgcttgggatgacagaattcatggatatgttgaaccattctgggtgatt
gtggaggataacgatggagaatacattcttcaccatgagtattttatgctgaaaaagcag
tatattgatgaggaccacacactgaatttcacagtgccaatttacgagcctcttccccct
cagtactttatccatgtcgtttcagataaatggcttgggtcccaaactgttttacctgtt
tctttcagacacctgatcttacctgaaaagtatcctccaccaacggaactattggatctg
caaccacttcctgtgactgcactgcgaaatccatcatatgaagctctatatcaggatttt
aagcattttaatcctgttcagacacaagttttcacagttttatacaattctgatgacaat
gttctagttgctgctccaactggaagtggtaagactatatgtgcagaatttgctgttttg
aggaatcatcagaaaggtcctgatagtgtcatgcgtgttgtttatgttgcacccattgaa
gctcttgccaaagagaggtaccgtgattgggagaggaaatttggaattggtctaaaactg
agggtggttgagttgactggagaaactgcaactgacttgaaacttctcgagaaaggtcag
attattatcagtactcctgagaaatgggatgcattgtcccgccgctggaaacagaggaaa
catgttcaacaagttagtcttttcatcattgatgagctccacttgattggaggtcaagga
ggtcctgttttagaggttgttgtttccaggatgcgatatattgctagtcaagttgaaaac
aagatccgcattgtggctttgtctacctcacttgcaaatgcaaaagatctcggagaatgg
attggagctacctcccatggtcttttcaatttccccccaggtgttcgtccagtgcctttg
gaaattcacattcaaggtgtagatattgctaactttgaggcaaggatgcaggcaatgacc
aagccaacttacactgctattgttcaacatgcaaagaataagaaacctgcgctcgtattt
gtacctactaggaagcatgttcggttgactgccgtggatctgattacatactcaggtgca
gacagtggagagaagccatttttgttgcggtccccagaagagcttgaacctttcctggac
aagattagtgatgaaatgttgaaagttactttgcgtgaaggagtgggatacctgcacgag
ggcttgaatagtcttgatcatgacattgtgacacagctattcgatgcaggctggattcaa
gtttgtgttttaaatagttccatgtgttggggggtgacattgtcagctcatttggttgtt
gtgatgggaacacagtactacgatgggcgagagaatgcacagacagattaccctgttact
gatctcctgcagatgatgggtcatgccagccgtcctctggtagacaattctggaaaatgt
gtcatcttgtgccacgctcctcgtaaggagtactacaagaagtttttatatgaagcattc
cctgttgaaagccatcttcatcacttcttgcatgataacttgaacgctgaaattgttgct
ggaattattgagaacaagcaagatgctgtagattaccttacatggacattcatgtacagg
cggctcacacagaatcctaactattacaatttacaaggagttagtcacagacatctttct
gatcacctctcagaaatggtggaaaatactttgagtgatttagaagcgagcaagtgcatt
actattgaggacgatatggacctttctcctctcaatcttggaatgatagcatcttattat
tacatcagttacacaacaattgaaaggttttcatcatccgtgacttcaaaaacaaaaatg
aagggtctgttggagattttgtcttcagcttcagagtatgctcagcttccaatacgacct
ggagaggaagaggttgttcgtaagttgattaatcaccagaggttttcctttgaaaacccc
aaggtcacagatccgcatgtaaaagctaatgccttgctacaggcccatttctctaggcaa
tttgttggtgggaaccttgcattagaccagaaggaggtgcttctttctgcaaatagactg
cttcaggcaatggtagacgtgatatcaagcaatggttggctgagtctggctcttcttact
atggaggtcagtcaaatggtgacacagggtatgtgggaacgtgattccatgctactacag
cttcctcatttcacaaaggatctggccaaaaaatgccaggataaccctgggaagagtatc
gaaactgtttttgatttattagagatggaggatgatgagaggcgtgaattactgggaatg
tcagattcacagttgttggatattgcccgattttgcaaccggttccctaatattgatttg
tcatatgaggttctggacagtgacaatgttcgagctggggaggatgtaactttactggtc
acccttgagcgggatcttgagggaaagacagaaataggacccgttgatgctccaaggtat
ccaaaagccaaggaggaaggatggtggcttgttgttggtgataccaaaaccaatctgttg
cttgccattaaacgggtttctctgcagaggaagctaaaagccaaactggagtttgctgct
cctgctgatactggaaggaaatcctatgctctttatttcatgtgtgattcatacttgggt
tgtgatcaggaatatggtttcactgttgatgttaaggaagctgatggtgacgatgaagat
agcggcagagaatga
DBGET
integrated database retrieval system
