Vigna radiata (mung bean): 106762064
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Entry
106762064 CDS
T04126
Name
(RefSeq) uncharacterized protein LOC106762064 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106762064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106762064
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106762064
mRNA degradation factors
5'-3' decay
Decapping complex
106762064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
PDF1_C
Motif
Other DBs
NCBI-GeneID:
106762064
NCBI-ProteinID:
XP_014501242
UniProt:
A0A1S3U5E9
LinkDB
All DBs
Position
5:30354966..30365029
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AA seq
882 aa
AA seq
DB search
MVDMDGFGAGGGVDGAPNTENLRELGNVTSEGAVFDASQYAFFGKEVELGGLEDDDRLPT
LDSNEEEFFFNREDADDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEW
SQREDSINWFDQNPYDSEGSTDSKRWSSQPHSSLAHLHDSKPLYRTSSYPEQQRQEQHYH
LQHCSSEPVPNWLDQHIYDSETAHDHDGKRWSSQPHSSIPHLPESKPLYRTSSYPDKQQE
LPRFSSEPILVPKSSFTSYPPPGGLSQHASPSHSTGHLNSPYHSAAAQMALSSQNRSHFS
NSALQSGALNLGSHFGGNTRQFPTGSHLNQRLQNQLVNQAGLYPGDHSSLLNNMLQQQFH
LHNGSVSPHLMTQLQQQQHRLRHPVQRSAGYLSGYQSHLFNAHLSSGSSAINKYDHVLGL
ADGRDHRPKSTHKGKHGLRHSQHGSDAIQKSDSGSFQFRSKYMTSDEIESILRMQHAVTH
SNDPYVDDYYHQACLAKKSSVAKLKHPFCPTQIREIPPRTRANAEPHAFVQVDALGRVSF
SSIRRPRPLLEVDPPNTSISSDQNISEKPLEQEPRFAARVAIEDGLCLLLDVDDIDRYLQ
YNQLQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLVSLPKGRK
LLAKYLKLLPPGSELTRIVCMTVFRHLRFLFGGLPSDLSASETTNNLAKVVCQCVRGMDL
GALSACLAAVVCSAEQPPLRPIGSTSGDGASLILIAVLERATELLTDPHAACNYNMGNRS
FWQASFDEFFGLLTKYCMNKYHSIMQSMLIQSTSNMDDVGPDAAKAISREMPVELLRASL
PHTDERQRKLLLDFAQHSIPVVGFNSNTGGNGGHVNSETVLS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgggtttggagctgggggtggcgttgatggtgctcccaacacagag
aatcttagagaattggggaatgttacctcagaaggtgcagtttttgatgcatcgcaatat
gcattcttcgggaaagaagtcgagttgggagggttagaagatgatgaccgtttgcctact
cttgattctaatgaagaggagttctttttcaatagagaagatgccgatgatgtgagatct
ctttctgatattgatgatcttactaccacttttttgaagttgaacaagttcgtcagtgga
ccaagaagcgcaggagttattggtgaacgcggatcaagagaaaattcaacatctgaatgg
tcacaaagggaagatagtattaactggtttgatcagaatccttatgatagtgaaggttct
acagatagcaaaagatggtcatcacagccccattcttccctagcccatttacatgattca
aagcccttgtacagaacatcatcatatcccgagcagcaaaggcaggaacaacactaccac
ctccaacattgctctagtgaaccagttccaaactggcttgatcagcacatttatgattca
gaaactgctcatgatcatgatggcaaacgatggtcatcacagccacattcctccattcca
catttaccagaatcaaagcctttgtacagaacatcttcatatcctgacaagcaacaggag
cttcctcgtttttctagtgaaccaattttggtaccaaagtcttcttttacttcttatcct
ccccccggtggtctatcccagcacgcttctcccagccatagtacaggacacttaaacagt
ccttatcatagtgcagcagctcagatggctttatcatctcagaatcgttctcatttctcc
aattctgcactgcagtcgggtgctttaaatcttgggtcacattttggtggaaacacacgc
caatttcctactggttcccatcttaatcagcgattacagaatcaattggtcaaccaggca
gggttgtaccctggagatcactcaagtctccttaataatatgttacaacaacaatttcac
cttcataatggatcagtatctcctcacttgatgactcaattacaacaacagcagcataga
ctgcgtcatcctgtgcagcgttctgctggctacttatcaggctaccagtctcatctattc
aatgcccacctttcctctggctcatctgcaattaacaaatatgaccatgtgcttggtctt
gctgatggtagagatcataggccaaaatcaactcataaaggtaaacacggtcttcgacat
tcccaacatggttctgatgccattcaaaagagtgatagtggttcatttcagttccggtcc
aagtatatgacaagtgatgaaattgaaagcattcttagaatgcaacatgctgtgacacat
agtaatgacccgtatgtagatgactactaccaccaagcttgtctagcaaaaaagtcttct
gtggccaagttaaaacatccattttgcccaacccagataagggaaattcctccacgaacc
cgtgctaatgctgaaccacatgcatttgtgcaggttgatgccctagggagagtttcattt
tcatctattcgtcggcctcgccctcttcttgaggttgatcctccaaacacttccataagc
tctgatcaaaatatttcagagaagcctcttgagcaggaacctaggtttgctgccagagtt
gcaattgaggatggtctttgccttcttctggatgtggatgatattgatcgttacctacag
tacaatcagctacaggatggtggaacacaattaagacgaagaaggcaagtcctgttagaa
ggacttgcaacttcacttcaacttgttgacccactgggaaagaatggacacaaagttgga
cttgctgccaaggatgaccttgttttcttacggttggtatctcttcccaagggacgcaag
ctccttgcaaagtatcttaagttgcttcctcctggcagtgagcttacgaggatagtctgc
atgacagtctttcgtcatttgagattcttatttggtggtcttccctcagatctgtcagct
tcagagactacaaataatctggccaaggtggtttgccaatgtgtacgaggaatggatctt
ggtgctcttagtgcctgtcttgctgcagttgtttgttctgcagagcagcctcctctacgt
cccattggaagcacctctggagatggtgcttcccttattttaatagctgttcttgagagg
gctactgaacttctgactgatccacatgctgcctgcaactacaacatgggtaatcgttca
ttttggcaggcctcatttgatgaattctttggccttctcaccaagtattgcatgaataaa
tatcatagtatcatgcaatccatgctcatacaaagtacctcgaatatggatgatgtcgga
ccagatgctgccaaagctattagtagagaaatgcctgttgaactcttgcgtgctagtctt
cctcacaccgatgagcgtcagaggaagttattactagattttgctcaacactccattcct
gtggttggatttaacagcaacactgggggtaatggaggtcatgtgaattcagaaacagtg
ttaagttga
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