Vigna radiata (mung bean): 106762070
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Entry
106762070 CDS
T04126
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106762070
03015 mRNA surveillance pathway
106762070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106762070
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106762070
mRNA cycle factors
P-body specific factors
106762070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Cytomega_UL84
Motif
Other DBs
NCBI-GeneID:
106762070
NCBI-ProteinID:
XP_014501248
UniProt:
A0A1S3U5D2
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Position
5:complement(4811558..4825172)
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AA seq
1189 aa
AA seq
DB search
MDQHEDESNSKQDDEEAVARLEEIKKSVEAKMSLRQSNLNPERPDTGFLRTLDSSIKRNT
AVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSLLHQR
YKDFAPSLIQGLLKVFSPGKPGDESDADRNLKAMKKRSTLKLLLELFFVGVIEDGGIFIN
IIKDLTNGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGPEIHEEFFKGLNITADQKK
VFRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLY
RNVSSLAEALDMQPPVMPEDGHTTRVTSGEEGISSASGKDSSAVEPIWDDEDTRTFYECL
PDLRAFVPAVLLGETEPKSSDQSAKGQDQPTEIVPESDKSQQTTHESGEISIESNALPEA
ESTERVKDKEEKEKSKELDREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSR
DLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLAYYSRMVATLSTCMKDVSSILLQ
MLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIASPGLVFSCLKACLDDFTHHNIDV
ACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSA
RVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWNECETYLLKCFMKVYKGKYGQI
HLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLELNDYSMQQRRIAYMRFLGELYNYEHV
DSSVIFETLYLILVYGHGTSEQDVLDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRF
LIHFQRYILSKGALPLDIEFDLQDLFADLRPNMARYTSIEEVNAALVELEEHDRIVSADK
ASGEKHSDNEKSSSRTTSITTVVGNGQSIDNGTEENGVQDDVNDSETDSGSDTIDVEGHD
DEELDEENHDDGCETEDDEDDDEDGPGPATDEEDEVHVRQKVTEVDPLEEADFDQELKAV
VQESMEQRRQELRGRPTLNMMIPMNVFEGSTKDHHGRGVSGESGDEELDEDTGGNKEVQV
RVLVKRGNKQQTKQMFIPRNSSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLG
TQPANWMQSVGNKTGGRGSTLEGNSGRGSGSRHRHHNYSGSGIYYSRRK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcatgaggatgaaagtaacagcaaacaagacgatgaggaagctgttgctcgc
cttgaggaaataaaaaagtccgttgaggcaaagatgtctttacgtcaaagcaatttgaat
cctgaaaggcctgatacaggattcttaaggacactggattccagtattaagcgcaacacc
gcagttatcaagaagctgaagcagatcaacgaggaacagcgtgaatctctgatggatgag
ttgagaagtgtcaacttaagcaaatttgtcagtgaagccgtgactgcaatatgtgatgcc
aaacttagaagttctgatatacaagctgcagttcagatttgttctttgcttcatcaaagg
tacaaggacttcgcaccaagcctgattcaagggcttctcaaagtcttctctcctggaaaa
cctggtgatgagtcagatgctgatagaaacttgaaggcaatgaagaagcgcagcaccctg
aaacttctattggaacttttctttgttggagttattgaagatggtggcatttttataaat
atcataaaagatcttacgaatggggaacagctgaaagatcgggatgctgcacaaacaagt
ttgacccttctttctagttttgctcgtcaggggagaatttttcttggactctctgttagt
gggccggaaattcatgaagagttttttaaaggccttaacatcacagccgatcagaagaaa
gttttccggaaagcatgctattccttttatgatgctgctgctgaactacttcagtctgag
cattcttcacttcgattaatggagcatgaaaactcaaagattttgaacgcaaaaggagag
cttagtgatgaaaatattgcttcatatgaaaagcttcgtaaatcctatgaccatttatac
agaaatgtttcatcattagcagaagcacttgatatgcagcctcctgtaatgccagaggat
ggacacacgactagggttaccagtggtgaggagggtatttcttctgcttctggtaaagat
tcttctgctgttgaaccgatatgggatgatgaagatacaaggactttctatgaatgttta
cctgatcttagagcgtttgttcctgctgtgcttttgggagaaacagagccaaaaagcagt
gatcaatctgcaaagggtcaagaccaaccaactgaaatagtacctgaatcagacaaaagt
caacagaccacccatgaaagtggagagatctctatagagtctaatgctttgccggaggca
gaaagcacagaaagagtgaaggataaggaagaaaaagaaaagtctaaagaattggacaga
gagaaggaaaaagaaaaagataatgataaaaagggggaaaatgaaaaagacaaactcaga
agtcttgaagggacaaatttggatgctctactgcagaggcttcctggttgtgtgagccgg
gaccttatagatcaattaactgttgagttctgttatctgaattcaaaatcaaatcgaaaa
aagcttgtgagggctctgttcaatgtgccaaggacatctctagaactgctagcatattat
tcacgcatggttgccacactctcaacttgtatgaaggatgtctcctccattctgttacaa
atgctggaggaggaattcaatttcttaataaataaaaaggaccagatgaacattgagaca
aagataaggaatatcaggttcattggagaactttgcaagttcaaaattgcttctcctggc
ctagtcttcagttgtttgaaggcctgtttagatgattttacacatcacaacattgatgta
gcttgcaatcttcttgaaacatgtggccgttttctgtatcggtctccagaaactagtata
cgaatggctaacatgttggagatactgatgcgcttgaaaaatgtaaaaaatttggatccg
agacatagcactttagtggagaatgcatactacctttgcaaaccaccagaaagatctgca
cgagtagctaaagttcgtcctccattgcatcagtatatcagaaaattacttttctctgat
cttgacaagtctaccattgagcatgtgctgaggcaactgcgcaaattaccttggaatgaa
tgtgagacatatcttttgaagtgcttcatgaaggtctacaaaggaaaatatggtcagatc
cacctcattgcatctcttgctgctggattaagtcgctatcatgatgagtttgctgtagct
attgttgatgaggttcttgaggagattagagttgggctggagttaaatgactacagtatg
cagcaaagacgcattgcttacatgcgatttttaggggagctttacaactatgagcatgta
gactcttctgttatttttgagacactttatctcattctcgtctatggtcatgggacatca
gagcaagatgtacttgatccacctgaagattgttttcgcataaggttgatcattactcta
cttgaaacttgtgggcattactttgatcgtggctcttctaagaggaaacttgatcggttc
ctaatacacttccagaggtatattttaagcaaaggagcactacctctggacattgaattt
gacttacaggatctgtttgcggacttacgacccaatatggctcgttacacttctattgaa
gaagtgaatgcagctctagtagaacttgaggaacatgatcggatagtttctgctgataag
gctagtggtgaaaaacattctgacaatgagaagtcttcaagtaggaccacttccattact
actgtggttggcaatggacagagcattgacaatggtacggaggaaaatggagtgcaagat
gatgttaatgacagtgagactgattcagggagtgacacaattgatgtagagggtcatgat
gatgaagagttggatgaggagaatcatgatgatggctgtgaaactgaggatgatgaagat
gatgacgaggatgggcctggacctgctactgatgaggaggatgaagtgcatgtgagacaa
aaagtaactgaggtggaccctctggaagaggctgattttgatcaggagctcaaggctgta
gtgcaggagagtatggaacagagaaggcaagaactacggggtcgtcctacattaaacatg
atgattccaatgaatgtctttgagggatcaaccaaggatcaccacgggaggggagttagt
ggggaaagtggtgatgaggaacttgatgaggatactggtggaaacaaagaggttcaggtg
agagttcttgtgaagcgtggaaacaagcagcaaacaaagcagatgttcatcccccggaat
tcctcactggtgcagagtacaaaacagaaagaagcagccgagcttcaagagaaagaagac
atcaagaggcttgttttagagtataatgacagagaagaggaggagcttaatggattaggg
acccagccagcaaactggatgcagagtgtaggtaacaagactggtggccgtggtagcact
ttggaaggaaacagtggcaggggtagtggatcaagacatcgacatcataactattctggc
agtggaatatattatagcagaagaaagtga
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integrated database retrieval system
