Vigna radiata (mung bean): 106762208
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Entry
106762208 CDS
T04126
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vra03036
]
106762208
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106762208
microRNA pathway
RISC loading complex
106762208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
PAZ
dsrm
SWI2_SNF2
DND1_DSRM
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
106762208
NCBI-ProteinID:
XP_014501466
UniProt:
A0A1S3U643
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All DBs
Position
5:complement(20216875..20238858)
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AA seq
1669 aa
AA seq
DB search
MNFNHDSSDHNQNQSKKRKQPDVDNYTSLELSTSNMNPRSYQIEVFEVARRRNTIAVLDT
GSGKTLIAVMIMKEVGQTIKSLGMKKLIVFLAPTVHLVNQQFNNIRYLTDFQVEEYYGAK
GVDTWTLKTWEQEISTNDVLVMTPQILLDALRKAFMRMEMICLIVIDECHRATGNHPYTK
IMKEFYHQAKEKPKIFGMTASPVGKRGVSSTTDCEVQISELESILDSQRYTVEDRAEMSR
YILSAKESCRFHDQARFSALSLKPKIEALWSKFDALLSENKSNYMDVENKFKTLSQRMSN
ELGKILHCLEDLGILCAYEAVKICHENFSKTEGTCETYRTGYLQCITFVEEVIKLIEESL
HCDDKNILGVDFDYSKAEDMGHISPKLLELIKIFQSLGESSQVSCLIFVDRIITAKVIER
FAKKVPQISHFSVSYLTGNSTSVDAVAPKRQKEILESFRSGKVNLLFTTDVLEEGIHVPN
CSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRNQLFDIIRSERSMTDASI
HKDRESNLRVFTVGKTDTYYVDSTGACVTLDSSVNLIHRYCGTLPQDQYSSAKPTYVSLP
VEGGYQCKLTLPSNSVLQTIIGPLGKDIRLARHLACFEACKKLHQMGALNEHLVPFIEDV
SEDDHIVKNKESSSGAGTTKRKELHGTANICALSGAWGDKLDVEARFFAYKLEFTCSIVS
EIYSGFVLLVESKLDDDVGNIESDLYLVSKVVKASVSSCGQVDLDAKQMMKAKCFHELFF
NGLFGRLVFRSKSAGGETEFLLQKDTKSLWRAKHLYLLLPLEKLNGICEGALQINWHGID
SCASAIEFLRRRYSLVTGDCDDNGIVKSPQDTSSVEMEYVGTNKIHFANCVLDADNIKNT
LVLAIHTGKIYCIIDIDSNLFPESSFCGNNEKSKEHVTYSDYFSKRYGITLRHPRQALLL
LKQSHNPHNLLFNFHEEDARDKSSQIGSTTSKVPAHVHLPPELLYVLEFKRNVLRSFYLL
PSLMYRIESLMLSSQLREEIDGQTSKSNINSSLILEALTTLRCSESFSMERLELLGDSVL
KYVVSCHLFLKYPKKHEGQLSAKRSLAVCNSTLHKLAIERKLQGYIRDSAFEPQRWVAPG
QRSIHPVCCDCGLETLEVPLDVKFHTEDPKVVVGKFCDRGHRWMCSKTISDCVEALIGAY
YVGGGLFASLNVMKWLGIEAELELSLVDEAITAASLHTCMPKESEIAILEKKIGYEFSVK
GLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYKSHTDIDPGVLTDLRSASV
NNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYVKAISESDPRSLPSIRAPKALGDLVESI
VGAMLIDSKLGLDRVWEVFCPLLSPIVTPEKLELPPFRELNELCDSLGYCIKVNENCEKK
GSMMQVEVSVQLPNDLLVREGKGPNKKTAKGEASFHLLKDLEKRGISYCNFMSKGKRDNS
VHINDSPHLKMDSSACFTLNEEHSSELHKRNRFDKTNPTESILPLKYSSGDDFGFSAPIP
VKLSIKTKKGGPRTTLFEVCKKLQWPVPAFDSTEYKDRSLFESCEALQGSKGLNCFVSKV
TLCIPKYGNIECQGEARSDKKSSFDSAAVKMLLELQKLGKVEIDPPLSS
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaccatgattcatcagaccataaccaaaatcaaagtaaaaaacgaaagcaa
cccgatgttgataattatacatccctggaattgtctacttccaacatgaaccccagaagt
tatcagatagaagtgtttgaagttgcacggagaaggaacacaatagccgtgttggataca
ggctctggtaagaccttgattgcggtgatgattatgaaagaggttggtcaaaccatcaag
tctttgggaatgaagaagctgattgttttcttggctcccacagttcatctagttaatcag
caattcaataatataagatatctgacagattttcaagttgaggaatactatggggctaaa
ggagttgatacatggactttgaagacatgggagcaggagattagtaccaatgatgtattg
gttatgacacctcagattcttttggatgccttaagaaaagcattcatgcgtatggaaatg
atatgcttgattgttattgatgaatgtcatagagcaactggcaatcatccctatacaaaa
ataatgaaggaattttatcaccaagcaaaggaaaagccaaagatttttgggatgacagca
tcaccggttggtaaaagaggtgtttcctccactacggattgcgaggttcaaatatcagaa
cttgaaagcatcttggattctcagaggtatactgttgaagatcgggcagagatgagtaga
tatatattgtctgctaaagagagttgtagatttcatgaccaagcacgattttctgccttg
agtttgaaaccaaagattgaagccttgtggtcaaagtttgatgcattgttatcagaaaat
aaaagcaactatatggatgtggagaataaatttaagacactgtctcagcgaatgtccaat
gaacttggaaaaattttacattgccttgaagatcttggaatcctatgtgcttatgaggca
gttaaaatctgtcacgagaatttctccaaaactgaaggaacgtgtgaaacttacagaaca
ggttatcttcagtgtataacttttgttgaagaagtaataaaattaattgaagaatccctc
cattgtgatgataaaaacattttgggggttgattttgattattcaaaggcagaagatatg
ggacacatatctcccaagttacttgaacttattaaaatcttccaatcacttggagaatct
agtcaggtgtcgtgccttatttttgttgatagaatcattacagctaaggtgattgaaaga
tttgcaaagaaagttccccaaatttctcatttctcagtttcctatttaactggaaacagt
acatcggttgatgctgtggctcctaaaaggcagaaggaaatattggaatcttttcgctct
ggaaaggtcaatctattatttactactgatgtacttgaggaaggaattcatgtgccaaac
tgctcatgtgtgataagatttgacctcccaaagacagttcgtagttatgtccaatctcgc
ggaagatctaggcaggctaactcccaatttgttgtgatgttggagaggggaaacctgaag
caaagaaatcaactctttgacatcattaggagtgagcgctccatgactgatgcatctata
cataaggaccgtgaatctaatttaagggtatttacagtggggaaaacagatacatactat
gtggattctactggagcttgtgtgactttagattctagtgtaaatcttatccaccgatac
tgtggaacacttccccaagatcagtactcctctgcaaagcccacttatgtgtctctgcca
gtggaagggggttaccaatgtaaattaacattgccatctaattcagtcctccagacaata
attggtccattaggaaaagatattcgtttggcaaggcatcttgcttgtttcgaagcttgt
aagaagttgcatcaaatgggtgctttaaatgaacatttggttccattcatcgaagatgtt
tcagaagatgaccatatcgtgaaaaataaagaatctagttcgggggcaggaaccacaaag
agaaaggagttacatggaacagccaacatttgtgcactaagtggtgcatggggagacaaa
cttgatgttgaagccagattttttgcctacaaactagaattcacatgtagtattgttagc
gaaatatactctgggtttgttcttttggttgagtcaaagcttgatgatgatgtgggaaat
attgaatcagatctttatttagtctcaaaggtcgtgaaagcttctgtctcttcatgtggg
caagttgatttggatgctaaacagatgatgaaagcaaaatgcttccatgagctttttttc
aatggtttgtttggtagattggtgtttaggtcaaaatcggcaggaggagaaacagaattt
ttactacaaaaagacacaaaatcattatggagagcaaaacacttatatttgcttctacca
cttgagaaattgaatggtatttgtgagggagccttgcaaattaattggcatggaattgat
tcttgtgcatctgctatcgaattcttaaggagaagatattctttggtcactggagattgt
gatgataacggaatagtcaaatcacctcaggataccagttcagtggagatggaatatgtt
ggaacaaacaagattcactttgctaattgtgtgcttgatgctgacaatataaaaaacacg
ttggttttggcgattcatactggaaaaatatattgtatcattgacattgacagtaacctg
tttcctgaaagttctttctgtggaaataatgaaaaatccaaggaacacgttacctactca
gattatttcagtaaaaggtatgggattaccctgagacatccgagacaggctcttttatta
ttaaagcaaagtcataatccacacaatcttctttttaactttcatgaggaagatgcacga
gacaaatcatcacaaattggctctacaacctccaaagtgcctgcacatgttcacctccca
cccgagcttttatatgttcttgaatttaaaagaaacgtgttgaggtcattttacttgttg
ccatctctaatgtaccgcattgagtcattaatgttatctagtcagcttagagaagagata
gatggtcaaactagcaagtccaacataaatagctcactgattctagaggcacttacaact
ttgagatgcagtgaaagtttttcaatggaacgtcttgagttgctaggagattctgtttta
aagtatgtggtgagctgtcacctctttcttaaatatcccaagaagcatgaaggacaatta
tctgccaaacgatctctagcagtttgtaattcaacccttcataaattggcaatagaacgt
aaattacagggttatattcgagactctgcatttgaaccacaacgttgggttgctccggga
cagcgttctatacaccctgtttgttgtgattgtggattggaaacccttgaagtgccttta
gatgttaaattccacaccgaggatcccaaagttgtggttgggaagttttgtgacaggggt
caccgctggatgtgttctaagactatttctgactgtgttgaagctctaataggagcatac
tatgtggggggtggactatttgcatcacttaatgtgatgaaatggcttggaattgaagca
gaacttgaactatccttggttgacgaagcaatcactgctgcctctctgcatacttgcatg
ccaaaagaaagtgagattgcaatccttgaaaagaaaattgggtatgaattttctgtcaag
ggactcttactggaggctatcacacatttgtctgagaaggaacttgggattggctgttgt
tacgagaggcttgaatttcttggtgactcagtgttggacctgcttatcacatggcattta
tataagagtcacacagatattgatccaggggtgttgactgacttgcgatctgcctctgtc
aataatgacaactttgctcaagttgctgttagacataaccttcaccagcatctcctacat
ggctcaggattattactgagccagatatcagaatatgttaaggccatttctgaatcggat
cctagatcacttccaagcattagagctccgaaggcacttggagatctagtggaaagtatt
gttggcgcaatgctaattgattccaagctcggtctagaccgagtgtgggaggttttctgt
cctctcttatcccccatagttacacctgaaaaacttgaattgcccccgtttcgtgaatta
aatgaattgtgtgattctcttgggtactgtataaaagtaaatgaaaactgtgaaaaaaag
ggatccatgatgcaagttgaggttagtgtacagttgccaaatgatttgttggttcgtgaa
ggaaaggggccaaataagaaaactgcaaaaggagaagcttcttttcatttgttgaaggac
cttgagaagcggggaatttcatattgtaatttcatgtccaagggaaaaagggataattct
gtccatatcaatgattcacctcatctcaaaatggattctagtgcttgttttactcttaac
gaagaacattcctcagagttacataaaaggaacagatttgataaaacaaacccaactgaa
agtattttgcctctcaaatactcttctggtgacgactttggttttagtgctccaattcca
gttaagttatcaattaaaacgaaaaagggaggaccacggaccacactatttgaggtgtgt
aagaaacttcagtggccagtgcctgcatttgattcaacagaatataaagatagatctcta
tttgaatcctgtgaagctctgcaaggaagcaagggactgaactgttttgtgtcgaaagtt
accttgtgcatacccaagtatggaaatatagagtgccaaggagaagctagaagtgataag
aaaagctcctttgactctgctgcagttaaaatgcttcttgagctgcaaaaattgggaaaa
gttgaaattgatcctcccctttctagttaa
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