Vigna radiata (mung bean): 106762300
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Entry
106762300 CDS
T04126
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03030
DNA replication
vra03420
Nucleotide excision repair
vra03430
Mismatch repair
vra03440
Homologous recombination
vra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106762300
03420 Nucleotide excision repair
106762300
03430 Mismatch repair
106762300
03440 Homologous recombination
106762300
03460 Fanconi anemia pathway
106762300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vra03000
]
106762300
03032 DNA replication proteins [BR:
vra03032
]
106762300
03400 DNA repair and recombination proteins [BR:
vra03400
]
106762300
Transcription factors [BR:
vra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106762300
DNA replication proteins [BR:
vra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106762300
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106762300
MMR (mismatch excision repair)
106762300
DSBR (double strand breaks repair)
HR (homologous recombination)
106762300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-like
RMI1_C
Motif
Other DBs
NCBI-GeneID:
106762300
NCBI-ProteinID:
XP_014501619
UniProt:
A0A1S3U6L0
LinkDB
All DBs
Position
5:2542610..2545404
Genome browser
AA seq
634 aa
AA seq
DB search
MSVNLTENAIPAIIGGDVNAKPLVQVLDVALVSSTNNSQQQRYRLLISDAVFSHHAMLAT
QLNDRIRTGRVRKGSVVQLLDYICTPFKNRKIIMVLNMETIIADFEIIGNPKPPLDSDLP
SVRAIADNTVENLARSNNTSNTISNSAAQNASQDKAQNFRPTIQPPYQPPPVYKGRGAVM
KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV
TCFNAVVDRFYNVIEVGKVYMISKGSLKPAQKNFNHLKNEWEILLESTSTVELCPDEDDS
IPRQQFSFRPISDIENVDNNSILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDTSGRN
VELTLWGEFCNREGQQLQEMIDSGFFPILAVKAGKVNDFSGKSIGSISTTQLFINPEFPE
ANSLRQWFDLVGKDSASHSISRDVIPGGTKNEVRKTVSQIKDEGLGRSDRPDWITIRATI
SFIKTDTFCYTACPLMIGDRQCNKKVTRSGNTSWQCDRCNQEFEECDYRYLLQAQILDGT
GVTWVTAFQEAGEEIMEYSAKDLYLLKHEQQDDERFGEILKSRLFKQFMFRLKIKEELYG
DEQKVKITVVKVDKVNYSSESQYMLDSISKFCRK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctcaccgaaaacgcgattccggcgataattggtggcgacgtgaacgcc
aaaccgcttgttcaggttttggacgtagcgttagtctccagcaccaacaactcgcagcag
cagagataccgtctcctgatttccgacgccgttttttctcaccacgcgatgctcgccact
cagctcaacgaccgaatccgaaccggtcgagttcggaagggttcggttgttcagcttctc
gattatatatgcactcctttcaagaaccgcaagattattatggttctaaacatggaaact
ataatagctgattttgagatcattgggaatccgaagccacccttggattcagatttacca
agtgtgagagctatagcagataacactgtggagaatttggccaggagtaataatactagt
aatactattagtaactctgctgctcaaaatgctagtcaagataaagcccagaatttcagg
ccaacaattcaacctccataccaaccgcctcctgtttacaaaggccgtggtgcagttatg
aaaaatgaggcgccagcacgcatcattcctatagctgctttaaatccttatcaaggtcgg
tgggctatcaaggcaagggtaactgctaaaggtgatctgcgccgctacaataatgcacgt
ggtgatgggaaagtcttctcatttgatctcctggattctgatggaggtgaaatacgagta
acatgctttaatgctgttgttgatcgcttctataatgtaattgaagttggtaaagtttac
atgatatcgaaaggtagcttaaaacctgcacagaagaatttcaaccatttgaagaatgaa
tgggaaattcttttggaatcaacttcaacagtagagttgtgcccggatgaggatgattct
atacctagacagcagttctcattccgacctatcagtgacattgagaatgttgacaataac
tccatccttgatgttattggggttgtgacatctgtgaacccttctgttcccatcttgagg
aagaatggaatggaaacccagagaagaattttgagtctaaaagacacttctggcaggaat
gttgaacttacactgtggggagaattttgcaatagggaagggcaacagttgcaagagatg
atagactctgggtttttccctattttagctgtcaaagccgggaaggtgaatgattttagt
ggaaagtcgataggctctatttctaccacacagcttttcataaatcctgagttccctgag
gccaatagcttaagacaatggtttgatctagttggaaaagattctgcttcccattcaatt
tctagggacgttattcctggaggaacgaagaatgaggttcgcaaaactgtatctcaaatc
aaggatgaaggtctgggacgatcagacaggccagactggataacaataagggcaaccata
tcattcatcaagactgatacattttgttacacagcttgccctctgatgattggagatcga
caatgcaataaaaaagtgactaggtcaggaaacacaagttggcaatgtgatagatgcaat
caggaatttgaggagtgtgattaccgataccttctccaagctcaaattctggatggcaca
ggagtaacttgggtaactgctttccaggaagcaggtgaagagattatggagtattcagcg
aaagatctgtacttgttgaagcatgaacaacaggatgatgagaggtttggagaaatactc
aagagccgactcttcaaacagtttatgtttaggctgaaaatcaaagaggaattatatggc
gatgaacagaaggtcaagattactgtagttaaggtagataaggtgaattattcttcagag
agtcaatacatgcttgattcgatttccaagttttgtaggaagtga
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