Vigna radiata (mung bean): 106762460
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Entry
106762460 CDS
T04126
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106762460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vra03400
]
106762460
Enzymes [BR:
vra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
106762460
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106762460
DNA repair and recombination proteins [BR:
vra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106762460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
106762460
NCBI-ProteinID:
XP_014501869
UniProt:
A0A1S3U7B8
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Position
5:complement(25475728..25481700)
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AA seq
397 aa
AA seq
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MPELPEVEAARRAVEENCVGKKITKCIVADDSKVIDAVSRSDFEASVLGKLIVAAHRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDEDEWPSKYSKFFIELDDGLEL
SFTDKRRFAKVRLLEDPTSVPPVSELGPDALFEQMTLEKFTESLHKRKTEIKALLLDQSY
ISGIGNWVADEVLYQARIHPRQAASSLSDASCSILYQCIKEVIEKAVEVGADSSQYPNSW
IFHSREKKPDKAFVDGKKIDFITAGGRTTAYVPELQKLSGSADVKETGKTKRQASKKVST
ADDTEKPTDSKEGDLGSVKSKKGAKAGAKGRKPAKKQKPEESDENNDSDAGTDCDTDQVV
KKNAGNVTNRKRVGEEKLSKKRVQSNQTGRSSKRKAK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaggtagaggcggcgaggagggccgtcgaggaaaactgcgtcggc
aagaagataacgaaatgcattgtcgccgatgattccaaagtcatcgacgccgtttctcgc
tcggacttcgaagcttccgttctcggcaagctcatcgtcgctgctcatcggaagggaaaa
aacatgtggcttcagcttgattcccctccttttccttccttccaattcggcatggctggt
gctatatacattaaaggagtcgcagtaacaaagtacaaaaggtcagctgtgaaggatgag
gatgagtggccctcaaaatattcaaaattcttcattgagttagacgatggattagagttg
tctttcactgacaagaggcgatttgctaaagttcgtcttcttgaagatccaacatcagtg
ccacccgtatctgaacttggtcctgatgctctttttgaacaaatgacacttgagaagttt
acagagtctttgcacaagaggaaaactgaaatcaaggctttattacttgatcaaagctat
atttcaggtattggaaattgggtggctgatgaagtgctgtaccaagcaagaattcatcca
cggcaggcagcttctagcctgtctgatgcaagctgctcaattttgtaccaatgcattaaa
gaggtcattgaaaaagcagttgaggttggagcagatagtagtcagtatcctaacagttgg
atatttcattcacgggaaaagaagcctgacaaggcttttgttgatgggaagaaaattgac
ttcatcactgctggtggtaggacaactgcttacgtgccagagttgcaaaagcttagtgga
tctgccgatgtaaaagaaactggtaagactaaaaggcaagcttcaaagaaagtaagtaca
gctgatgacactgagaaaccaacagatagtaaagaaggggatctcggaagtgtcaaatca
aagaagggggcaaaagctggagctaaaggcaggaagcctgctaaaaagcaaaaaccagag
gaaagtgatgaaaacaatgacagtgatgctggtacggattgtgatactgatcaagttgta
aagaagaatgcaggcaacgtgactaataggaaacgagttggggaagagaagctatcaaag
aaaagagttcaaagcaatcaaactggtaggagttcaaaaaggaaagctaagtag
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