Vigna radiata (mung bean): 106762472
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Entry
106762472 CDS
T04126
Name
(RefSeq) THO complex subunit 5A isoform X1
KO
K13174
THO complex subunit 5
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106762472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106762472
03041 Spliceosome [BR:
vra03041
]
106762472
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106762472
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106762472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
106762472
NCBI-ProteinID:
XP_014501896
UniProt:
A0A1S3U7B1
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Position
5:21753823..21759519
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AA seq
804 aa
AA seq
DB search
MEDGEIEEGSIGGVEEEEHSSEPHKSEESPYEMLRNSKASVENIVADILSIKKDRKPKQH
LQDLATQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKA
IKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCK
LHEKLELQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAEL
LPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDNDNSTTVESSKLEDD
APDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIIYVYEDQHSDSKSSKLITLRFE
YLVKLNVVCVGIEGSNEGPENDILCNLFPNDTGLELPQQSAKLFVQEAIAFNTLRTSRPY
KWAQHLAGIEFLPEVSPLLLTDDSGAVKNENIISGLSLYRQQNRVSTVLKRIRDRRKAQL
ALLEQLESLAKLDWPRLSCSSVPWAFHTPLCNLDSWSPVRLPPVPRESSSPAVIDEEEHV
QEPMDADVNERSDVTKTEPESITEDGELPTLLPNMSKLDHSTQLNLISKSIIPPLNKIRS
HSFKKFDDSSDFLLDTESDIDEPAQTELEHENTLSNYHDRNSVSWMDHGLKEFCLVLCRK
ISADENNVNLEAKIKISMEYPLRPPLFALSVRCISSGEKRDKLGLEWYNELRAMEAEVNL
HILRMLPVNQQNYVLAHQVSCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLG
RCFRGRDRRKMISWKDMKLNSSCP
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggtgagatagaagagggatcaataggtggtgtagaggaagaggagcattcc
tcagagcctcacaagtcggaggaatcgccctacgaaatgttgcgcaacagcaaggcttcc
gtagagaacatcgtcgccgacatactctccattaaaaaagaccgaaaacctaaacaacat
cttcaggatctcgctactcagatgttcttacacttcatcactcttcgccaggcaaatcgc
tctatcttgctcgaggaagaccgcgtcaaaaccgaaacggagcgtgccaaggcgccggtg
gatttcactacgctgcagcttcacaacctcatgtacgagaaaaaccactatgttaaggcg
ataaaggcctgcaaagacttcaaatcgaaatatcctgacattgaccttgttcccgaggag
gagtttttccgcgacgctccacaagatatcaaggactccgttttgtcgaatgacgcggcg
cacaatctcatgctccggaggctcaatttcgagttatttcagcgtaaagaactctgcaaa
cttcatgagaagctggaactgcagaagaaaatcctcttgcagactattgcaaaccgaaag
aagttcctgacaagtctcccatcacatctcaaatcacttaagaaggcctccttgcctgta
caaaaccaactcgggcttcatcatactaagagattaaagcagcatcattctgcagagtta
cttcctccggccctgtacgtgatttactcacagttgttggctcaaaaggaggcctttgga
gaaccaattgatctggagattataggaagcctgaaagatgctcaagcttttgctcgtcaa
caggctcacaaggacaatgacaattccactacagtggagagttccaaattggaagacgat
gctcctgatgaagaagaagatggtcagagacggaggaaaaggccacgaagggttcaagca
aaggagagccttgaccaggggggaatatttcaagttcatccacttaaaatcattatctat
gtgtatgaagatcagcattctgattcaaaatcttccaaacttattaccctaaggtttgag
tatttggtgaagttgaacgttgtatgtgttggaatagaaggttctaatgaaggtccggag
aacgatatcttatgtaatttattccctaatgatacgggacttgagcttccccagcagtct
gccaaactctttgttcaagaagctatagcattcaatactttaagaacttcacgtccttac
aaatgggctcagcacctggcggggattgaattcttgcctgaggtgtctcccttacttctt
actgacgacagtggagcagtgaagaatgaaaatattatatctggtctttcactatatcgt
cagcagaaccgagtatcgacggttctgaagaggattcgtgatagaagaaaagctcaattg
gctcttctggaacagctagaatctctcgcaaagcttgactggcctcgtttgtcctgcagt
agtgttccttgggcttttcacactccgttgtgcaatttggatagttggtcaccagtaaga
cttccacctgtacctagagagtcctcatctcctgctgtcatcgatgaagaggagcatgta
caggaaccaatggatgctgatgtaaatgaacgttctgatgtcacaaaaacagaacctgag
agtatcacagaagatggggagcttccaactttgcttcctaacatgtccaagcttgaccat
tccacacagctgaacttaatttctaaaagtatcattcctccactcaataaaatcaggtca
cacagtttcaaaaagtttgatgacagttctgatttcttgctggatactgaaagtgacata
gatgaaccagcgcagactgaactagaacatgaaaatacattatccaattaccatgacaga
aattctgtgtcatggatggatcatgggctcaaggaattttgtttggttctttgcagaaaa
atcagtgcagatgagaacaatgtgaatttagaagctaagataaagatcagtatggaatat
cctctaaggcctcctctttttgcattgagcgttcgctgtatatcttctggggaaaagcgt
gataagttaggattagagtggtacaatgaactccgtgcaatggaagcagaggtcaatcta
cacatactgaggatgctacctgtcaatcaacaaaattatgtactcgctcatcaagttagt
tgtcttgccatgttgttcgactattatttggatgaggcattcccatcgtctgaaaggaca
aattgtacttccgtggttgatgttggcttatgtaagcctgttactggtcgattcctgggt
agatgttttagaggaagggaccgcaggaagatgatctcctggaaagacatgaaactcaat
tccagctgtccctaa
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