Vigna radiata (mung bean): 106762532
Help
Entry
106762532 CDS
T04126
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03020
RNA polymerase
vra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106762532
09124 Replication and repair
03420 Nucleotide excision repair
106762532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106762532
03400 DNA repair and recombination proteins [BR:
vra03400
]
106762532
Enzymes [BR:
vra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106762532
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106762532
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106762532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106762532
NCBI-ProteinID:
XP_014501986
UniProt:
A0A1S3U7K5
LinkDB
All DBs
Position
5:2756881..2770282
Genome browser
AA seq
1195 aa
AA seq
DB search
MDLEEEQEYEEQMMEDEEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGI
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWH
DLVSKGYIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKN
SFECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLTKDVKSKKKDQKKKGA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaggagcaggagtacgaggagcaaatgatggaggacgaagaggacgag
gacgagatcacgcaggaagacgcttgggccgttatctcggcgtacttcgaagagaaaggc
ctcgttcgtcagcagctcgattccttcgacgagttcatccaaaacaccatgcaggaaatc
gtcgatgagtctgctgacattgaaattcgacccgagtctcagcacaatcctggtcaccaa
tccgatttcgcagagactatttataaaatcagtttcggtcagatttacttgagtaagcct
atgatgacagagtctgatggagaaacggccaccttgtttcccaaggctgctaggttaagg
aacctcacgtattcagctcctctgtatgttgatgtctctaagagggttataaagaagggg
catgatggtgaagaggtcactgagactcaggatttcaccaaagttttcattggcaaggtt
cctataatgcttcggtctagttactgcacattataccagaattcagagaaggatttgact
gagcttggggaatgcccgtatgatcaaggtgggtatttcattattaatgggagtgagaaa
gttctaattgctcaggagaagatgagcaccaaccatgtctatgtctttaagaagaggcag
ccaaacaagtatgcctatgtggctgaagttcggtccatggcggagtcacagaacagacca
cccagtactatgtttgtgcgcatgctttctcggactagttccaaagggggttcttcagga
caatatatacgtgccactcttccttatattcgaactgaaattcccatcattattgtgttt
cgagcattggggtttgttgctgataaagatatattagagcatatatgctatgacttttcg
gacactcaaatgatggagttgctacgtccttctctggaagaagcgtttgtaattcaaaat
caacaggttgcacttgactacattgggaaaagaggagccactgttggtgtaaccaaggaa
aagagaattaagtatgctaaggagatccttcaaaaggagatgcttcctcatgttggcatt
ggggaatattgtgagaccaagaaagcttactattttggatatatcattcaccggctacta
ctctgtgcacttgggcggagagctgaggatgatagggatcattacggaaacaagaggctg
gatctggccggtcctttacttggtggcctttttagaatgctattcagaaagctaacaaga
gatgtcagggcgtatgtacagaagtgtgttgataatgggaaagatgttaatctgcaattt
gctatcaaagcaaaaaccatcacaagtggccttaaatactcacttgctactggtaattgg
gggcaagcaaatgctgcagggactagagctggagtttcacaggtgctgaaccgcttaacc
tatgcatccactttatcgcacttgcgaagactgaattccccaatagggcgtgaagggaag
ttggccaaaccaagacaattgcataattcacaatggggaatgatgtgtccagcagaaaca
cccgaaggacaagcctgtggactggtgaagaatctggcattgatggtctacataacagtt
ggttcagctgcatatcctattctagagtttttggaagaatggggcacagagaattttgag
gaaatttctcctgcagtgattccccaagcaacaaaaatttttgtaaacggttgctggatg
ggtatccatcgtgatcctgatatgttggtgagaacattaagaaagctgagacgacgggtt
gatgttaacactgaagttggggttgtcagagatatccgtcttaaagagttgcgtatatat
acagactatggtcgttgcagtcgtcctttattcattgtggataagcaaaggcttctcata
aagaagaaggatattcatgctttacaacaaagggaatcccctgaagagggtggatggcat
gatctagtgtccaagggctatatagaatatattgacacggaagaagaagagactacaatg
atttccatgacaattaatgatcttgtacaagctaggatcaatccagaagaagcatattct
gatacgtatactcattgtgaaatccacccatcactgattttgggtgtatgtgcgtccatc
ataccatttcctgatcacaatcagtccccacgtaatacgtatcagtctgcaatgggaaag
caagcaatgggaatatatgttaccaactaccagtttcggatggacaccttggcctatgtt
ttatattatccacaaaagccattggtcactacaagagccatggagcatcttcatttccgt
caactcccagctggaattaatgccatcgtggccatttcctgttattctggttacaatcaa
gaagattctgtgatcatgaaccaatcatcaatagaccgtgggttctttcggtctttgttt
ttccgttcatatagggatgaagaaaagaagatgggaaccctagtcaaagaagattttgga
cgtccagatagagctaacaccatgggaatgagacacggttcttatgataagctggatgat
gatggtcttgcaccaccaggcacaagagtatctggagaggatgttattattgggaagacc
accccaatatctcaagaggaggcacagggacaagctttacgatacactaggcgtgatcac
agcataagcttacgtcacagtgaaactggaattgttgatcaagttttgctgacaacaaat
gctgatggattgagatttgtgaaagtccgagtgagatctgttcgtataccacagattggt
gacaaattcagtagtagacatggtcagaagggtactgttggtatgacttatacgcaagaa
gacatgccctggactgtggaaggcatcacccccgatattattgtcaatccacatgccatt
ccttctcgaatgacaattggtcagcttatcgagtgtatcatggggaaggtggcagctcac
atgggaaaagaaggagatgctactccttttacagatgttactgtggacaatatcagcaaa
gctctgcacaaatgtgggtatcaaatgcgaggttttgagactatgtacaatggtcataca
ggtagacgtctcagtgcaatgattttccttggtcctacatattaccaaagactgaagcac
atggttgacgacaagatccattctcgtggtcggggtcctgtgcagatcctcacaaggcaa
cctgctgagggacggtcacgagatggaggtctccgatttggagagatggaacgagattgc
atgatagctcatggagctgctcacttcctgaaggaaaggttgtttgatcaaagtgatgca
tatagggttcatgtatgtgagcaatgtgggttgatagctattgcaaatctcaagaagaat
tcctttgagtgcagggggtgcaaaaacaaaactgacattgttcaggttttcattccgtat
gcttgtaaactcctcttccaagagttaatggctatggctatagctccaagaatgcttaca
aaggacgtcaaatctaaaaagaaggaccaaaagaagaagggagcctga
DBGET
integrated database retrieval system
