KEGG   Vigna radiata (mung bean): 106762555
Entry
106762555         CDS       T04126                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03013  Nucleocytoplasmic transport
vra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106762555
  09122 Translation
   03013 Nucleocytoplasmic transport
    106762555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106762555
   03041 Spliceosome [BR:vra03041]
    106762555
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106762555
Spliceosome [BR:vra03041]
 Complex C
  Other components
   EJC/TREX
    106762555
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106762555
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 106762555
NCBI-ProteinID: XP_014502017
UniProt: A0A1S3U7R6
LinkDB
Position
5:complement(25689432..25703370)
AA seq 604 aa
MEVFKRAILQPGPPENFALKTVQEIIKPQKQTKLVQDENQFLENILRMLLQEFVSAAASS
EKIMQFGQSIDSSGTTQGYIPRLLDIVLYLCEKDHIEGGMIFQLLEDLTEMSTMKNCKDI
FGYIESKQDILGKHELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
SALNIKGVFNTSNETKFEKEPLEGICIDFNFYQTFWGLQEFFSNPASVSHAPIKWQKFTS
SLSVVLNTFEAQPLTDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQCL
ILFDYLKAPGKGDKDLPSESMKEEIISCEERVKKLLELTPPKGSEFLHKIEHILEREKNW
VWWKRDGCLPYEKQPIDKKAVPEGSKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVQ
TPSIMEYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRLAARQDLEGFSKFTDHGIEGV
VPLELLPPDVRSKYQAKPNDRSKRSKKEETKGSAHQVEENQIATTATEMDGDGIRTDNTA
TPMEFDGASVPGTQGGTPTPEELQKHSSDTDVGQEAGQLEADAEVEAGIIDGETDADVDL
DTVG
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggaggtattcaaaagggccatactacagcctgggccacctgaaaattttgctttgaag
acagtccaagaaataataaagcctcagaaacaaacgaagttggtccaagatgagaatcaa
ttcctagaaaatattttacgtatgctgcttcaggagtttgtgtcagcagcagcatcttct
gagaaaataatgcaatttgggcaatccattgattctagtggaactactcagggatacatt
cctcgcctccttgatattgtactatatctgtgtgagaaagaccacattgaaggtggaatg
atttttcagctattggaagacttgacagaaatgtctacaatgaaaaactgcaaagatatt
tttggctatatagagagtaaacaagacatattgggcaaacatgaactttttgctcgagga
aaacttgtgatgctgagaacctgcaatcaacttcttcgacgtctgtcaaaggcaaatgac
gtggtcttttgtggaagaattctcatgtttttagctcatttctttccattatcagagcgg
tcagctctaaatatcaaaggagttttcaacacatcaaacgaaacaaaatttgaaaaagaa
cctttggaaggcatatgcattgatttcaatttttatcagactttttggggacttcaggaa
tttttttctaaccctgcttccgtaagtcatgctccgataaagtggcagaaattcacatct
agtttgtcggttgtattaaatacatttgaagcacaacctttgactgatgaagaaggagat
gctaataatttggaggaagaggcggttaattttagtataaaatatcttacaagcagcaaa
ctaatgggtctagagttaaaggatccaagttttcgacgtcacgttcttgtacagtgtctt
atattatttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaaagc
atgaaagaagagatcatatcatgcgaggaacgtgttaaaaaacttcttgaactgacacca
ccaaaagggtcagagtttcttcacaaaattgagcatatattggaacgagaaaagaattgg
gtgtggtggaagcgtgatggctgcttgccatatgaaaagcaacctatagataagaaagca
gtaccagagggatccaagaagcgtaggccaagatggagactgggaaataaagagttatcc
cagttatggaaatgggcagatcaaaatccgaatgctttaactgatcctcaacgagttcaa
acaccttcaattatggagtactggaaacccttggctgaagatatggacccctccgctgga
atagaagctgaatatcatcacaagaataacagggtttattgttggaaaggtctccggctt
gctgctcgacaagacttggaggggttttctaagtttactgatcatggcattgaaggggtt
gtcccactagagcttttgccaccagatgtccgatctaaataccaagctaaaccaaacgac
agaagtaaacgtagcaaaaaggaagaaacaaaaggctctgcacatcaagttgaggaaaat
cagattgccacaactgcaactgagatggatggggatggcattcgaacagataacacagca
acgcctatggaatttgatggtgccagtgtccctggtactcaaggtggaaccccaacacct
gaagaacttcagaagcatagctcagacactgatgtaggacaggaagccggccaattagaa
gcagatgctgaagttgaggctggaatcatagatggtgagacagatgcagatgttgattta
gataccgttggctga

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