Vigna radiata (mung bean): 106762555
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Entry
106762555 CDS
T04126
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106762555
09122 Translation
03013 Nucleocytoplasmic transport
106762555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106762555
03041 Spliceosome [BR:
vra03041
]
106762555
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106762555
Spliceosome [BR:
vra03041
]
Complex C
Other components
EJC/TREX
106762555
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106762555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
106762555
NCBI-ProteinID:
XP_014502017
UniProt:
A0A1S3U7R6
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All DBs
Position
5:complement(25689432..25703370)
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AA seq
604 aa
AA seq
DB search
MEVFKRAILQPGPPENFALKTVQEIIKPQKQTKLVQDENQFLENILRMLLQEFVSAAASS
EKIMQFGQSIDSSGTTQGYIPRLLDIVLYLCEKDHIEGGMIFQLLEDLTEMSTMKNCKDI
FGYIESKQDILGKHELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
SALNIKGVFNTSNETKFEKEPLEGICIDFNFYQTFWGLQEFFSNPASVSHAPIKWQKFTS
SLSVVLNTFEAQPLTDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQCL
ILFDYLKAPGKGDKDLPSESMKEEIISCEERVKKLLELTPPKGSEFLHKIEHILEREKNW
VWWKRDGCLPYEKQPIDKKAVPEGSKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVQ
TPSIMEYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRLAARQDLEGFSKFTDHGIEGV
VPLELLPPDVRSKYQAKPNDRSKRSKKEETKGSAHQVEENQIATTATEMDGDGIRTDNTA
TPMEFDGASVPGTQGGTPTPEELQKHSSDTDVGQEAGQLEADAEVEAGIIDGETDADVDL
DTVG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggtattcaaaagggccatactacagcctgggccacctgaaaattttgctttgaag
acagtccaagaaataataaagcctcagaaacaaacgaagttggtccaagatgagaatcaa
ttcctagaaaatattttacgtatgctgcttcaggagtttgtgtcagcagcagcatcttct
gagaaaataatgcaatttgggcaatccattgattctagtggaactactcagggatacatt
cctcgcctccttgatattgtactatatctgtgtgagaaagaccacattgaaggtggaatg
atttttcagctattggaagacttgacagaaatgtctacaatgaaaaactgcaaagatatt
tttggctatatagagagtaaacaagacatattgggcaaacatgaactttttgctcgagga
aaacttgtgatgctgagaacctgcaatcaacttcttcgacgtctgtcaaaggcaaatgac
gtggtcttttgtggaagaattctcatgtttttagctcatttctttccattatcagagcgg
tcagctctaaatatcaaaggagttttcaacacatcaaacgaaacaaaatttgaaaaagaa
cctttggaaggcatatgcattgatttcaatttttatcagactttttggggacttcaggaa
tttttttctaaccctgcttccgtaagtcatgctccgataaagtggcagaaattcacatct
agtttgtcggttgtattaaatacatttgaagcacaacctttgactgatgaagaaggagat
gctaataatttggaggaagaggcggttaattttagtataaaatatcttacaagcagcaaa
ctaatgggtctagagttaaaggatccaagttttcgacgtcacgttcttgtacagtgtctt
atattatttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaaagc
atgaaagaagagatcatatcatgcgaggaacgtgttaaaaaacttcttgaactgacacca
ccaaaagggtcagagtttcttcacaaaattgagcatatattggaacgagaaaagaattgg
gtgtggtggaagcgtgatggctgcttgccatatgaaaagcaacctatagataagaaagca
gtaccagagggatccaagaagcgtaggccaagatggagactgggaaataaagagttatcc
cagttatggaaatgggcagatcaaaatccgaatgctttaactgatcctcaacgagttcaa
acaccttcaattatggagtactggaaacccttggctgaagatatggacccctccgctgga
atagaagctgaatatcatcacaagaataacagggtttattgttggaaaggtctccggctt
gctgctcgacaagacttggaggggttttctaagtttactgatcatggcattgaaggggtt
gtcccactagagcttttgccaccagatgtccgatctaaataccaagctaaaccaaacgac
agaagtaaacgtagcaaaaaggaagaaacaaaaggctctgcacatcaagttgaggaaaat
cagattgccacaactgcaactgagatggatggggatggcattcgaacagataacacagca
acgcctatggaatttgatggtgccagtgtccctggtactcaaggtggaaccccaacacct
gaagaacttcagaagcatagctcagacactgatgtaggacaggaagccggccaattagaa
gcagatgctgaagttgaggctggaatcatagatggtgagacagatgcagatgttgattta
gataccgttggctga
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