Vigna radiata (mung bean): 106762572
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Entry
106762572 CDS
T04126
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03082
ATP-dependent chromatin remodeling
vra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106762572
03083 Polycomb repressive complex
106762572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vra03036
]
106762572
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106762572
Histone modification proteins
HAT complexes
HATB complex
106762572
HDAC complexes
Sin3A-HDAC complex
106762572
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106762572
PRC2.2
106762572
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106762572
Heterochromatin formation proteins
Other heterochromatin formation proteins
106762572
Chromatin remodeling factors
NuRD complex
106762572
NuRF complex
106762572
NuRF complex (fruit fly)
106762572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106762572
NCBI-ProteinID:
XP_014502046
UniProt:
A0A1S3U7R4
LinkDB
All DBs
Position
5:2939878..2946342
Genome browser
AA seq
502 aa
AA seq
DB search
METPPQQGVVKKKETRGRKPKPKDDKKDEHSKTKEGRKTQQYQQQQQQQQQPSVDEKYTQ
WKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANC
EVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVL
VWDVENQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIE
DHITSAATGGSIIKPNSKSGEANDKTAESPSVGPRGIYCGHEDTVEDVTFCPSSAQEFCS
VGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNL
TTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSI
SAPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEE
EVLAELEKFKSHVVACASKSEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctcctcagcaaggtgtggtgaagaagaaggagacaaggggtcgaaaacct
aagccaaaggatgacaagaaagatgaacattccaagacaaaggaagggagaaaaacgcag
caatatcagcagcaacagcagcagcagcaacaaccttcggtcgatgagaaatacacgcaa
tggaagtctctcgtccctgtcctctatgactggcttgctaaccacaaccttgtttggccc
tctctctcttgccggtggggtcctcagcttgaacaagccacttacaagaatcgccagcgg
ctctatctttccgaacagactgatggtagcgtgccaaatactctggtgattgcgaattgc
gaggttgtgaagcctagagttgcggctgcagagcacatttcgcagtttaatgaagaggca
cggtccccgtttgtgaagaagttcaagaccatcatacatcctggcgaggtgaacagaatt
agggaattaccacaaaattccaagattgtggcaacacatacagatagccctgatgtcctt
gtttgggatgttgagaatcaacctaaccgtcatgctgtccttggagctacaaactctcgg
cctgatttgatattgactggacaccaagataatgcagaatttgctcttgctatgtgtcca
actgagccctatgttctttcaggaggaaaggataaaacggtggtattgtggagtattgag
gaccatataacatctgctgccacaggtggatcaattatcaagccaaactctaaatctgga
gaagccaatgataaaactgctgaaagcccttctgtcgggccacgaggtatctactgtggg
catgaggatactgttgaagatgtgactttctgtccatccagtgcacaggagttctgtagt
gttggagatgattcttgtctcatcttatgggatgcacgtgttgggtctagccctgtggtt
aaggttgaaaaagctcataatgctgatcttcactgtgttgattggaatccacatgatgat
aatctgattcttactgggtcagcagataattctgtacgcatgtttgatcgtcgcaatctc
accactaacggagttgggtcgcccatccataaatttgagggtcacaaagctgctgttctt
tgtgttcagtggtctccagacaaatcatctgtatttggaagttcagctgaggatggtctc
ttaaacatttgggactatgagaaggttggtaaaaagatagagcgatctggaaaatcaata
agtgctcctccagggttgtttttccaacatgctggtcatagagataaagtagtcgatttt
cactggaatgcatatgatccatggacaattgttagcgtctctgatgactgtgaaagtact
ggtggaggaggcacattgcagatatggcgcatgagtgatttgatctacagaccagaagaa
gaggttttagcggagctggagaaattcaaatctcatgtggtggcatgcgcttccaagtct
gaaaaatga
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