Vigna radiata (mung bean): 106763097
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Entry
106763097 CDS
T04126
Name
(RefSeq) THO complex subunit 5B isoform X1
KO
K13174
THO complex subunit 5
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106763097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106763097
03041 Spliceosome [BR:
vra03041
]
106763097
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106763097
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106763097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
106763097
NCBI-ProteinID:
XP_014502759
UniProt:
A0A1S3U9W0
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All DBs
Position
6:35209121..35212544
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AA seq
502 aa
AA seq
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MEDGETTGEVVAVPASNSEGVGDEKMFPHSPQQRDSNEESPHESLRKTKASIENIVAEIL
ALKKQAEPKPFLTLRLRELLTQTFLHFVTLRQANRSILLEEERARTETERAKAPLELTTQ
QLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDSPQDMKDSVLCSHSEHNLVL
KRLNFELFQRKELCKLHDKLEQKKKTLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLG
VQHTKKLKRHHLAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQSFAHIQAHKD
TGISSTVASPKLENDEPDEDGQRPSKRPRRFQGKESLDQVGIFQVHPLTVNLHIYDDEVS
DLESANLITLNFEYMMQLNIICVGIKASNDGPEDDILSNLFPDDTGLELPHQSAKLYVGD
AVMLFNCDRTSRPYKWAQHLAGIDFLPEVAPLMLSRRETPDGGEGAKGEDFLPSISQYRQ
HNRLQTVLQKIRSRIKARLVLQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgaaacgacgggggaggtggttgccgttccggcttcaaatagcgagggc
gtcggtgacgagaaaatgtttccgcattccccacaacaacgcgactcgaacgaggagtct
ccgcacgaatcgttgcgtaaaacgaaagcttcaatagaaaacatcgtcgccgagattctc
gctctgaagaaacaggccgaacccaaaccattcctcactctccgtctcagagagctcctc
actcaaacgttcctccatttcgtcactcttcgccaggccaatcgctccatcttgttggag
gaggagcgtgcgagaacggaaactgagcgtgcgaaggcgcctctggaactcaccacgcag
cagcttcagaacctgatgtacgagaagagtcactacgtgaaggcaataaaggcgtgtaac
gatttcaagtccaagtatcctgatattgaggtggtttcggagggagagttttttcgtgac
tcgccgcaggatatgaaggactccgttttgtgtagtcacagtgaacataatctcgtgctg
aagagactcaattttgaattgtttcagcgcaaagagctttgcaagcttcatgacaaactg
gagcagaaaaagaaaactcttttggagacaattgcaaaccgaaagaagttcttgtctagc
ctcccttcacatctcaagtctctcaagaaagcatccttgccagtgcaaaatcaactagga
gttcagcatactaagaaactaaagcggcatcacttagcagagttgcttccaccacctctt
tatgtgatttactcacagctgttggctcaaaaggaggcgtttggagaatctattgatgtg
gagattgtaggaagtgtcaaagatgctcaatcttttgcccacattcaagctcacaaggac
actggcatttcttctactgtagcgagtccgaaattggaaaatgatgaacctgatgaagat
ggtcagagaccgagtaaaaggccaaggaggtttcaaggcaaggagagccttgaccaagta
ggaatatttcaagttcacccacttacagtcaatctccatatttatgatgacgaagtctct
gatttagagtctgcaaacctcattactctaaattttgagtacatgatgcagttgaatatt
atatgtgtcgggatcaaagcatctaatgatggtcctgaggatgacatcttaagcaatttg
ttccctgatgacacaggtctcgagcttcctcaccagtcagctaagctctatgttggggat
gctgtaatgttgtttaattgcgatagaacttcacgtccttacaaatgggctcagcacctg
gctggtattgatttcttgcccgaggtggctccattgatgctttctagacgtgaaactcca
gacggtggtgaaggagccaaaggtgaagatttcttaccgagcatttcacaatatcgccag
cataaccgattgcagacagttctgcagaaaattcgttcaaggataaaagcacgtttggtt
cttcaataa
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