KEGG   Vigna radiata (mung bean): 106763121
Entry
106763121         CDS       T04126                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106763121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106763121
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106763121
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     106763121
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106763121
NCBI-ProteinID: XP_014502800
UniProt: A0A1S3U9V1
LinkDB
Position
6:complement(311875..315327)
AA seq 286 aa
MVGLSLGEKHFIQGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRMGATDVIASI
KAELGKPSSLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQDCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALCNTGIPRVQVAAGASND
EQPEVDVSDEEFLQFDTSGVPVIVTLTKIGRHYIVDATSEEESQMSSAVSISVNRQGHIC
GITKRGGVGLDPSIILDMISVAKHVSEQLMNKLDSEIASAEAEDES
NT seq 861 nt   +upstreamnt  +downstreamnt
atggtgggtttatctctcggagaaaaacatttcatacaaggtggcattgctcatgatctt
cgatgtgatggtagaaagagattgacatatcgaccaatcttggttgaaactggagtgatt
ccccaggcaaatggttcagctcgtgtcagaatgggtgccacagatgtcattgccagtatt
aaggctgaacttggaaagccaagctcgttgcaacctgacaaaggaaaagtctctatatat
attgattgcagttcgactgcagagccagcctttgagggtagagggggtgatgagttggca
gcagaactgtcaaatgctcttcaagactgtctcttgggtggtaaaagtggagcaggtgct
ggaattgacctttcatcacttattgtggttgaaggaaaaatttgttgggatctttacatt
gatggtcttgttgttagttcagatggaaatttgttggatgctctaggcgctgccattaag
gctgctttgtgcaatacaggtattccaagagtccaagttgctgctggagcatcgaatgat
gagcaaccggaagttgatgtaagcgatgaggagtttctgcagtttgacacatctggagtc
cctgtcatagttacactaactaagattgggaggcactatattgtggatgcaacgtcagaa
gaggaatcacaaatgagctctgctgtttccatctctgttaataggcaagggcacatctgt
ggcataaccaaacgaggaggtgtagggctggatccaagcatcattcttgatatgatatct
gttgccaagcatgtaagcgagcaattaatgaacaaattggattcagaaattgcttctgct
gaagctgaagatgagtcatga

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