Vigna radiata (mung bean): 106763839
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Entry
106763839 CDS
T04126
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106763839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vra03009
]
106763839
Ribosome biogenesis [BR:
vra03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
106763839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
106763839
NCBI-ProteinID:
XP_014503481
UniProt:
A0A1S3UBT1
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Position
6:30069841..30072804
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AA seq
309 aa
AA seq
DB search
MAPPRGRGGGGGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGGRGGGRGGGRGGG
RGGMKGGSKVVVQPHRHGGIFIAKGKEDALVTKNLVPGEAVYNEKRVTVQNEDGSKDEYR
IWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHR
SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLK
AGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRV
PKKKKDIAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcccagaggtcgtggtggtggcggtggaggtttcaggggtggtaggggtgac
agaggtagaggaagaggcggtggtggaagaggaggagataggggtacgccatttaaagcc
agaggtggtgggagaggaggaggcaggggaggtggacgtggaggaggtagaggtggtggc
cgtggtggaatgaagggagggagtaaggtcgttgttcaaccacatagacacgggggtatt
tttattgccaagggtaaggaagacgcccttgtcactaagaatcttgttcctggtgaagct
gtttacaatgagaaaagagtcactgttcagaatgaagatggttccaaagacgagtacaga
atttggaatcccttccgctcgaagttggctgctgccatccttggtggagttgataacata
tggattaaacccggtgccagagtcctttacttaggagctgcttctggcacaactgtttct
cacgtttctgacattgttggcccaacaggagttgtctatgcagttgagttttctcataga
agtggacgtgatttggtcaatatggcaaagaagcgtactaatgttatacccattattgaa
gatgccagacatcccgctaagtacaggatgttagttggtatggttgatgtcatattttct
gatgttgctcagcctgatcaggcaaggattttggggctcaatgcttcatattatctcaaa
gcgggaggtcattttgttatttcaatcaaggctaactgcatagactcaacagttcctgcg
gaggcagtgtttgaaagcgaagtgaacaagttgaaggctgatcaattcaagccattcgag
caagtcacccttgaaccatttgagagggaccatgcttgtgttgtcggtggatacagagtg
cctaagaagaaaaaagatattgctgcgtag
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