Vigna radiata (mung bean): 106764804
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Entry
106764804 CDS
T04126
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106764804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106764804
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106764804
Spliceosome [BR:
vra03041
]
Complex C
Other components
Step II factors
106764804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Sigma54_activ_2
AAA_16
ABC_tran
TsaE
GIPC1_GH2
PhoH
Flavi_DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
106764804
NCBI-ProteinID:
XP_014504690
UniProt:
A0A1S3UF77
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All DBs
Position
6:complement(37094927..37100275)
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AA seq
1199 aa
AA seq
DB search
MAVDNPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKE
NGAEMPDYFVRTLLTIIHAILPPKPKELKKEKESVNGKTKFKALAIADDRDRAKELRNEI
ESEAREKQSEQIEEDDGYRDRDRRDRRRDRYDEDDRRDHRRRGRDRDDEDDRRDYGRRGR
DRDDEDDRRDYSRRGRDKYDKDRDRDGDRYERRRRDDYEENGRGRENGERDGNKKGTRHV
SGEPELYAVYKGRVSRVMETGCFVQLEDIRGKEGLVHVSQMATRRITNAKDVIKRDQEVY
VKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDALRMNPQGSRDGPVTRTGLSGIRI
VEEDDVGSSRRPLKRMSSPERWEAKQLIASGVMSVSEYPTYDEEGDGLLYQEEGAEEELE
IELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTML
DSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQ
EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPR
RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQY
SVIMLDEAHERTIHTDVLFGLLKQLVKRRPKLRLIVTSATLDAEKFSGYFFNCNIFTIPG
RTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKG
LGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF
AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPE
IQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK
MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE
GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN
FTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTK
EYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagataatcctgaggatggattgaagaagttggaatatttgtctcttgtgtcg
aaggtgtgcaccgagttggagtctcacaccggcaccggcgacaaagttctggcggagttc
atcactgagttgggtcggtcatcggagaatgttgaggaatttgacgcgaaattgaaggag
aatggtgcggaaatgccggattactttgtccgaacgctcctcactattattcacgcgatt
cttcctcccaagccgaaggaattgaaaaaggagaaagagagtgtcaacggcaagaccaag
ttcaaggctctggccatcgcagacgatagggaccgggccaaggagcttcggaatgagata
gaatctgaggcaagggagaagcagagtgagcaaattgaggaagatgatgggtacagagat
agagatagaagagataggcgcagagataggtatgatgaagatgatagaagagatcatcgc
agaagaggaagagacagagatgatgaagatgatagaagggattacggcagaagaggtaga
gatagagacgatgaagatgatagaagggattacagccgaagaggaagagataaatatgat
aaggatagagatagagatggtgacaggtatgagaggcgcaggagagatgattatgaagag
aatggtcgtggaagggagaatggagagagagatggtaataagaagggtacacggcatgtt
tctggtgaacctgaattatatgccgtttacaaagggagggtgtccagggtaatggaaact
gggtgctttgtccagttagaagacataagaggcaaggaggggttggtccatgtgtcacag
atggccactcggaggatcacaaatgccaaagacgtcattaagcgcgaccaggaggtttat
gtaaaggtgatctcagtttccggtcagaagttgtctctttccatgagggacgttgatcag
cacacaggtaaggatctccttccgttgaagaagagctccgaggacgatgccttgaggatg
aatccgcagggttcaagggatggaccggttaccaggacaggtctttcaggtatcaggatt
gtagaagaagatgatgttggttcttcacggagacctctgaagagaatgagctcaccggag
agatgggaagcaaaacagttgattgcttcaggtgtgatgagtgtttcagagtatccaact
tatgacgaggagggagatggattgctgtaccaagaggaaggagccgaggaggagcttgag
attgagttgaatgaggatgaacccgcattcttgcaagggcagagcagatactcaatggat
atgtctcctgttaagatttttaagaatcctgaaggttctctgggtcgagctgctgcactt
cagtctgcacttataaaggagcgtagggaagtgcgagaacagcaacaacggacaatgctt
gattcaattccaaaggatctcaatcggccttgggaagaccctatgccagagtcaggtgaa
aggcatcttgcccaggagcttaggggtgttggtttatcagcctatgatatgccagaatgg
aagaaggatgcatatgggaaaacaattacctttgggcaaaggtcgaagctttctattcaa
gagcagaggcagagtttgccaatttacaagttaaaaaaagaattgattcaggctgtgcat
gataatcaggtgttggttgttattggagaaactggttcgggtaagactactcaggtcaca
cagtatcttgccgaagcaggttataccacaaaaggaaaaattggatgtactcaacctcgt
agggtggctgcaatgtcagttgcaaagagagtagcagaagagtttggttgtagattggga
gaagaagttggttatgccattcggtttgaggattgcactggaccagatactgttatcaag
tacatgacagatggtatgcttcttagggaaatattggtagatgagaatctgtcacagtat
tctgttataatgcttgacgaagcccatgaaagaactattcatactgatgttctttttgga
ctgctcaagcagctagtgaagcgaagacccaaattgcgattgattgtcacttctgctact
ctggacgccgagaaattttcaggatatttctttaactgtaacatctttacaattcctggt
agaacttttcctgtagagatactttataccaaacagccggaaagtgattatttagatgca
tctttaataactgtcctacagatacacttgacagagcccgagggagacattcttctcttt
ttgactgggcaagaggagattgattttgcttgccaatctctatacgagagaatgaaggga
ttaggtaagaatgttccagagctgatcattttaccggtttatagtgcccttcctagcgaa
atgcagtctaggatatttgaacctgctcctccggggaaaaggaaagtggtcgtggctact
aacattgccgaggcttctttgactattgatgggatattttatgttattgatcctggattt
gctaagcaaaatgtttataacccaaagcaaggtcttgattctttggtaataactccaatt
tcacaagcatcagccaaacaaagagctggacgtgcagggcgtactggacctgggaagtgt
tatcgcctttacactgagagtgcatacaggaatgagatgtctcccactacaattcctgag
attcaaagaataaatctggggatgactacacttaatatgaaagcaatggggataaatgat
ctactgtcctttgattttatggatccaccatcacctcaagcactgatttctgccatggag
cagctttacagtctaggagcattggatgaagagggccttctgaccaaattggggaggaaa
atggcagaatttcctttggatccacctttgtccaagatgttgcttgccagcgtcgacctt
ggatgcagtgatgagatcttaaccataattgccatgatccagactggtaatattttttac
aggccaagggaaaagcaagcccaagcagatcagaagagggcaaagtttttccagccagag
ggtgatcatctgacactacttgctgtttatgaggcttggaaagccaagaatttttctggg
ccctggtgttttgagaattttgtgcaatctagatcgttgagaagagcacaggatgtcagg
aaacaacttctcaccattatggataagtacaaattggatgttgtaagtgctggaaaaaac
ttcaccaaagtaaggaaggctatcactgctggattcttttttcacgctgccagaaaggat
ccccaggaaggatacagaactctagttgagaaccaacctgtgtatatccatccaagttct
gctttgttccagaggcagccagactgggtcatataccatgagcttgtgatgacaactaag
gagtatatgcgtgaggtgactgtcatagaccccaaatggcttgttgaactggctccaaga
tttttcaaagtagcagatcctacaaagatgagcaagcggaagcgtcaagagcgaattgag
ccactttatgatagataccacgagccaaattcatggcgtttgagtaaacgtcgtgcatga
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