Vigna radiata (mung bean): 106764874
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Entry
106764874 CDS
T04126
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106764874
09123 Folding, sorting and degradation
03018 RNA degradation
106764874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106764874
03041 Spliceosome [BR:
vra03041
]
106764874
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106764874
mRNA cycle factors
Stress granule specific factors
106764874
Spliceosome [BR:
vra03041
]
Complex C
Other components
Complex C specific factors
106764874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_Nup35
RRM_7
RRM_MARF1
SET1_RBD
DUF5062
Motif
Other DBs
NCBI-GeneID:
106764874
NCBI-ProteinID:
XP_014504789
UniProt:
A0A1S3UFQ2
LinkDB
All DBs
Position
6:35087889..35092219
Genome browser
AA seq
650 aa
AA seq
DB search
MAQIQAQQQGPVSAPPNGVAPAPNANQFVTTSLYVGDLDQNVNDSQLYDLFSQVGQVVSV
RVCRDLTTRRSLGYGYVNYSNPTDAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTAN
IFIKNLDKAIDHKALHDTFSSFGHILSCKIATDGSGLSKGYGFVQFDNEESAQNAIDKLN
GMLINDKQVYVGPFLRKQDRENALSKTKFNNVYVKNLSDSTTDEELKKIFGEYGTITSAV
VMRDADGKSKCFGFVNFENPDDAAKAVEGLNGKKFDEKEWYVGKAQKKSERELELKGRFE
QSIKEAADKFQGVNLYLKNLDDTISDENLKEMFSEFGTITSYKVMRDPNGISRGSGFVAF
STPEEASRALGEMNGKMIAGKPLYVALAQRKEERRARLQAQFSQMRPVAISPSVGPRMPL
YPPGAPGLGQQFLYGQGPPAMIPPQAGFGYQQQLVPGMRPGGGPMPSFFVPLVQQGQQGQ
RPGGRRGAGPVQQPQQPVPMMQQQMLPRGRVYRYPPGRNMQDVPLPGVAGGMMSVPYDMG
GLPIRDAVGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEMD
QPEVLHLIESPDALKAKVAEAMDVLRNVAQQQTNPADQLASLSLNDNLVP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggcacagcagcagggtccggtttcggctcccccaaacggtgtcgcg
ccggcgccgaacgcgaatcagttcgtgacgacgtcgctgtacgtaggcgatcttgaccag
aatgtcaatgactcgcaactctatgatctgttcagtcaggtcggacaagtcgtttcggtt
cgtgtctgcagggacttgaccacgcgtcgttcactcggctatggctatgtcaattacagt
aaccctaccgatgctgcgagggcattggatgtgctgaatttcactccactgaacaacaaa
tctattaggatcatgtattctcatcgggatcctagtattcggaagagtggtactgcgaat
atttttatcaagaatttggataaggctattgaccacaaggccttacatgatactttttct
tcttttggacacattctttcttgcaaaatagcaactgatggttctggcctgtctaaaggt
tatggttttgttcaatttgacaatgaagagtctgcacagaatgctattgacaagttaaat
ggcatgctgatcaatgataagcaggtctatgtaggtcctttcctgcgaaagcaagataga
gagaatgctctcagtaagacaaaattcaataatgtctatgtgaaaaacctatcagattca
accacagatgaagagttgaagaaaatttttggagaatatggcacaattactagtgctgta
gtaatgagagatgcggatggtaaatctaagtgttttggtttcgtcaattttgaaaaccca
gacgatgctgccaaagctgttgaggggcttaatgggaagaaattcgatgagaaggagtgg
tatgttggaaaagcccagaaaaaatctgagcgtgaacttgaattgaaaggaaggtttgag
cagagtatcaaggaagctgctgacaaatttcagggtgtgaacttgtatctcaagaacttg
gatgatactattagtgatgaaaatcttaaagaaatgttttctgagtttggtacaataact
tcatacaaggtaatgcgggacccgaatggaattagtagaggatctggatttgttgcattt
tcaactcctgaagaagcatctcgtgctcttggtgagatgaatggtaaaatgattgctgga
aagcctctctacgttgccctggcacagagaaaagaagagagaagagcaaggttacaggca
cagttttcacagatgaggcctgttgcaatttcgccttctgttggacctcgtatgcctctc
tatcctcctggtgctcctggactaggacaacaatttttgtatggtcaaggaccaccagcc
atgattcctccccaagctggatttggttaccagcagcagctagttcctggaatgaggcct
ggtggcggtccaatgcctagcttctttgttcctctggttcagcaggggcagcaaggacag
cgcccaggtggtcgccgaggagcaggtcctgtccaacaacctcagcagccagtgccaatg
atgcagcagcagatgcttccaaggggacgagtctatcgttaccctcctggccgcaacatg
caagatgtcccacttccaggtgtagctggtgggatgatgtctgtcccgtatgacatgggt
ggtctgccaatccgtgatgctgtgggacagccaatgcctattcaagctctggctacggcc
cttgcaaatgccccacctgagcagcagaggactatgctgggtgaagctttatacccgctg
gtggatcagctggaacatgacgcagcagcaaaggttactggcatgcttttggagatggac
cagcctgaagtgctacatctgatcgagtcaccggatgctctgaaggcgaaagttgctgaa
gccatggatgtgttgagaaatgttgctcagcagcaaaccaaccctgctgatcaactagct
tcactctctctcaatgacaatcttgtcccttag
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