Vigna radiata (mung bean): 106764886
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Entry
106764886 CDS
T04126
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106764886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106764886
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106764886
Complex C
U4/U6.U5 tri-SnRNP related factors
106764886
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
106764886
NCBI-ProteinID:
XP_014504806
UniProt:
A0A1S3UFS4
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Position
6:7327433..7333001
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AA seq
446 aa
AA seq
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MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIK
DEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG
STGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIR
RSPSSRRSQSREYPDRDRDRDRERSRSRDRDRDHDRDRERERDRDRERDRDRYRDRDRNR
EWERDRDRERYRDRDSDRDQERDRIRRDKERERERSYDYDRRSKHTERESSRDYDNGSRH
YRKSRSRSRSRSRSQSQQAGTARYESRSSPPRDGSKRTSASSNLAKLKDMYGDLGDNKGE
IRMEKIPRKDSGGEEVIRLGGSTWKY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacatgtggcaagccaattgactccttgctagaaaaggttctgtgcatg
aatattctgtcatctgattactttaaggaactctatcgattaaaaacttaccacgaagtt
attgatgagatctataatcaagttgatcatgtggagccgtggatgactggcaattgtcgc
ggcccttctactgctttctgtcttctttataaattttttacgatgaagctcactgtgaag
caaatgcacgggctgttgaaacaccccgattctccttacattagagcggttgggtttctc
tatttgagatattgtggagacccaaagacactatggagttggtttgaaccgtatataaaa
gacgaggaggaattttctcctggatctaatggtcgaatgactacaatgggtgtatacatc
cgtgatttgctacttggacagtattacttcgacacactgtttcctcgcatccccgttcct
gtattgcggcaggttgtgtctaatcttgaaaagttgaagctccccactacacattctggt
tcgactggggaatctacccgtcatggttctgatgatactgcccgcagaccaccttcggtt
aaagctgctctttcagtctcttttggtcagcgagctccacatcgtgcctccacaagggat
tcttcacctattcgccgtacattaccttctcatgaaagaaatggcagtgatgacataaga
agatctccaagtagtcgccgcagccaaagccgggaatatcctgatagggatagggatagg
gatcgtgagcggtcacggtccagagacagggatagggatcatgatagggatagggaaagg
gagagggacagggatcgagaacgtgatagggacagataccgtgatagagatagaaacagg
gagtgggagcgtgatcgagaccgggaaagatacagggatcgtgattcagaccgagatcag
gagagggacagaatccgaagggataaggagcgggagagagagaggagttatgattatgat
aggaggtctaagcacacagaaagagaaagcagccgggattatgacaatggtagccggcac
tatcgtaagagtcggagtagaagtagaagcagaagtaggagtcagagccagcaagccggc
actgctcgttatgaatcacgttctagtccaccaagagatgggagtaaaagaacttctgca
tccagtaatctagctaaacttaaagatatgtatggtgatttaggggataataaaggagaa
atccgcatggaaaaaattcccagaaaggatagtggaggggaagaggttataagacttggc
ggttctacttggaagtattga
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