Vigna radiata (mung bean): 106765005
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Entry
106765005 CDS
T04126
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106765005
Transcription machinery [BR:
vra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106765005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
DUF7003
TPR_14
Motif
Other DBs
NCBI-GeneID:
106765005
NCBI-ProteinID:
XP_014504966
UniProt:
A0A1S3UG21
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Position
6:29226740..29231617
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AA seq
545 aa
AA seq
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MGLSLNANRLRYCVPLHTPHSFTNSPVSLSPSSAGVKENCFNFTKLSLPSTFYEEAETLQ
KDFGRVYAFSALDTLENDSLGIEETGVNKGKMSVRSVHEIFDNTLMPFGEVSTVSKKFES
FTPQHFHLLMKNLDVLEETFADSEASRLEKDIRLQLEKLGALELFNVCLSRSLGSSLVSD
YADKVPNKSKVVVPSSKKKENKTRRKREIDVTTVSTQSLTLKANQEDLLGFSVSVVKRAT
NSKSKRVMVAKREAEMAKGVKVLAELEKIRTAIEDDTKRVVTLNHWAEASGVDEKVLQQL
LHHGYYCRDELIRSSRSLVLFLSRKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFS
TYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKCPDDLEIAKMTG
LSLDKIKSASNCLRIVASIDQKVGNCLGIEYNELLPDTTIESPENAVLKQHMKKDVHDLL
KGLNSRERQVLTLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRDEATTSDLH
YYLDL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcagcttaaacgccaacagactcagatattgcgttcctcttcatacccctcat
tccttcaccaattcacctgtttctctttctccatcttctgctggagtcaaggagaattgt
ttcaacttcacgaagttgtctttgccgtcgacattttatgaagaagcagaaactttgcag
aaagattttggaagggtttatgcattttccgcattggataccttggaaaatgattcatta
ggaatagaagaaactggggtaaacaaagggaagatgtcagtgaggagtgtacatgaaata
tttgataataccctaatgccttttggagaggtatctactgtctcaaagaagtttgagtca
ttcacgccacagcatttccatttattaatgaagaaccttgatgttttagaagagactttt
gccgattctgaagcatcaagattggaaaaggatattagattgcaactagagaagcttggt
gctctcgagttattcaatgtttgtctatcaagatcacttggaagctcacttgtgtctgac
tatgctgataaagtacctaacaagagcaaagttgttgtcccgtctagcaagaaaaaggaa
aataaaactagaagaaagagggaaattgatgtcacaacagtttccacacagtcattgact
ttaaaagctaatcaggaagatctattaggattctcagtttcagttgtgaaaagagcaaca
aatagtaaaagtaaaagagtgatggttgctaaaagggaggcagagatggcaaaaggtgta
aaggtgctagctgagttagagaaaattaggacagctatagaagatgataccaagcgagta
gtgaccttgaatcactgggcggaagcatctggagttgatgagaaggtgctacagcagcta
ttgcatcatggttattattgtcgggatgagctcatacggagttctcgttccttagttcta
ttcctttccagaaaatacaggggtatgggaatagctttggatgacttacttcaggcagga
tatgtaggtgttctccaaggagctgagagatttgacagtacaaggggttacaaattctca
acctatgtgcagtactggataaggaaatcaattttaagagtggtggaacgatattctcga
ggagtcataattccttggtcattaaacagggcaataaagcaaatccagaaagctcgaaaa
gtcttgaaaagtacacacaagaaatgcccagatgatttggaaattgcaaagatgacaggt
ctttcactagataaaatcaaatcagccagcaattgtctgagaatagttgcttcaattgat
cagaaggtggggaattgccttggtatagaatataatgaacttctgcccgatacaacaatc
gagagccctgaaaatgctgtcctgaagcaacatatgaaaaaagacgtacatgatctcctg
aaaggcttgaactcaagggaaaggcaagtattaaccctacgctttggccttattgataac
cagcccaagtctctgcaggatatagggacccttttcaaagttagcaaagagaggataaga
aaaatagagaaaatcgctcttacgaagttaagagatgaggccaccacctcagacttgcat
tattatttggatctgtag
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