KEGG   Vigna radiata (mung bean): 106765093
Entry
106765093         CDS       T04126                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03030  DNA replication
vra03410  Base excision repair
vra03420  Nucleotide excision repair
vra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106765093
   03410 Base excision repair
    106765093
   03420 Nucleotide excision repair
    106765093
   03430 Mismatch repair
    106765093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vra03032]
    106765093
   03036 Chromosome and associated proteins [BR:vra03036]
    106765093
   03400 DNA repair and recombination proteins [BR:vra03400]
    106765093
DNA replication proteins [BR:vra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106765093
  DNA Replication Termination Factors
   ELG1-RFC complex
    106765093
Chromosome and associated proteins [BR:vra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106765093
DNA repair and recombination proteins [BR:vra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106765093
  Check point factors
   HRAD17(Rad24)-RFC complex
    106765093
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 Sigma54_activ_2 DUF815 AAA_16 RuvB_N AAA_29 AAA_22 RsgA_GTPase AAA_5 AAA_23 nSTAND3 AAA_24 ABC_tran ATPase_2 NB-ARC TsaE nSTAND1
Other DBs
NCBI-GeneID: 106765093
NCBI-ProteinID: XP_014505079
UniProt: A0A1S3UGK4
LinkDB
Position
1:19073279..19080888
AA seq 354 aa
MLWVDKYRPKTLDHVMVHTDIAHNLKKLVKEQDCPHLLFYGPSGSGKKTLIMAVLRQMFG
SGAEKVKVENRTWKVDAGSRSLDIELTTLSSANHIEISPSDAGFQDRYVVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQILEVLEFIGRKEELQLPAGFAARIAEKSNRNLRRAILTFETCRVQQY
PFTNKQTIPPMDWEEHISEIASDIMKEQSPKRLFLVRGKLYDLLINCIPPEMVLKRLLHE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtagacaaatatcgtcccaaaaccctcgaccatgttatggtccacaccgat
atcgctcacaatctcaagaaattggtgaaggaacaagattgcccccatttactcttctat
ggcccttctggctctggcaagaaaaccctaatcatggccgttctccgccaaatgtttgga
tctggtgctgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctgggagtaga
tctcttgatatagagttgacaacattgtcaagtgccaaccacattgaaataagtccaagt
gatgcaggatttcaagacagatatgttgttcaagaggtaatcaaagaaatggctaagaat
agacccattgatactaaggggaagaaaggatttaaagtactcgtgctcaacgatgttgac
aaactctctagagaagctcaacattctcttcggagaacaatggaaaaatacagtgcttat
tgcagactaattctatgctgcaatagttcttctagagtcacagaagcaatccgctctaga
tgtctcaatgtaaggataaacgcaccaagtgaagaacagattcttgaagttttagagttc
attggtaggaaagaagagctgcaacttcctgctggttttgctgctcgcattgcagagaaa
tcaaatcggaatttaaggagggcaatattgacatttgagacttgtcgtgtgcaacagtat
cctttcactaacaaacaaacaattcctccaatggactgggaagaacatatttctgaaatt
gcatctgacataatgaaagaacagagccccaaaaggttgtttctagttcgagggaagctt
tatgacttgctaataaattgtattcctccggagatggttttgaagaggcttcttcatgag
ctattgaggaagctggatgcagagctaaagcatgaagtatgtcattgggctgcatattat
gaacatcggatgcgtcttggacagaaggcaatctttcacattgaagcatttgtggccaag
ttcatgagcatttataaatccttccttattgctactttcggctga

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