Vigna radiata (mung bean): 106765239
Help
Entry
106765239 CDS
T04126
Name
(RefSeq) zinc finger CCCH domain-containing protein 40
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106765239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106765239
Spliceosome [BR:
vra03041
]
Complex B
Other components
Prp19-related factors
106765239
Complex C
106765239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
RRM_YTH1
RRM_occluded
zf-CCCH_3
zf-CCCH_10
zf-CCCH
zf-CCCH_4
zf-CCCH_PARP12
RRM_3
Motif
Other DBs
NCBI-GeneID:
106765239
NCBI-ProteinID:
XP_014505271
UniProt:
A0A1S3UGW2
LinkDB
All DBs
Position
6:731333..735206
Genome browser
AA seq
485 aa
AA seq
DB search
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALHIDSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMATLEAPEDESIKTLYVGGLDARVT
EQDLRDHFYAHGEIESIKMVLQRACAFVSYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQTSKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGTFFYNNPPPMQQERSYYP
SMDPQRMGALISSQDGPPGGPSGSGENKSSLEKQQMQHYARPMMPPPPGQYHHQYYPPYG
YMPPVPPYQQYPPPPYNTAVPPSQPPAPNHPYQHSTQPGSSQTGSVQAAPAPAETGTSTS
GSQQQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaggttactcagagaccacgaagccgacggttgggagcgttctgatttcccc
ataatatgcgaatcctgtctcggagacagcccctatgttcgaatgacaagggcagagtat
gacaaggagtgcaagatttgtacacggccattcactgtgtttagatggagaccaggcaga
gatgcgagatataagaaaactgagatatgtcagacatgtagtaaattgaaaaatgtctgt
caagtgtgccttctggaccttgaatatggactacctgttcaagtccgagacacagctctt
catattgattccaatgatgccattccaaaaagtgatgttaacagggagtattttgccgaa
gagcatgaccggagggctagagctggtatagattatgaatcttcttatggaaaagcacgc
cctaatgatactatcctgaagcttcaaagaacaaccccttattacaaaagaaacagagca
catatttgcagtttctacataaggggtgaatgtaccagaggagccgagtgcccttataga
cacgagatgccagaaactggggaattgtctcaacaaaatattaaagatcgttattatggg
gtgaacgatccagtggccttgaagctacttggcaaggcaggggagatggctactctggag
gctcctgaggacgagagcattaaaacactctatgttggtgggcttgatgctagggtcact
gagcaggatttgcgggatcacttctatgcccacggagaaattgaatctataaaaatggtt
ctgcaacgggcgtgtgcttttgtatcgtatactacccgagaaggtgcagaaaaggcagca
gaagaactctcaaacaaactggttattaaaggcctaaggctaaagctgatgtggggcagg
cctcagacatcaaaacccgagtcagatggctctgatcaagctaggcagcaggcatctgtg
gctcatagtggattgttgcctcgggcagttatatcacagcagcagaatcaggaccaaaca
caaggaacatttttctataacaatccaccacctatgcagcaggaaagaagttattaccca
tcaatggatcctcaaagaatgggtgctcttatttcatctcaagacggtcctcctggtggg
ccttctgggtccggggagaacaaatccagtttggagaagcagcaaatgcaacactatgcc
cgaccaatgatgcctcctccacctggccaatatcaccatcagtattaccctccatatggt
tatatgccgccagtccccccttatcaacagtacccaccacctccatacaatactgctgtc
cctccatcccagccgcccgctccaaatcatccttatcagcattctacgcaaccagggtct
tcacagacagggtctgtacaggctgcacctgccccagctgaaactggaacatcaacatca
gggtcacagcagcaatga
DBGET
integrated database retrieval system
