Vigna radiata (mung bean): 106765360
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Entry
106765360 CDS
T04126
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106765360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vra03400
]
106765360
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106765360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
106765360
NCBI-ProteinID:
XP_014505428
UniProt:
A0A1S3UHC0
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All DBs
Position
6:4836911..4843695
Genome browser
AA seq
1306 aa
AA seq
DB search
MVNRKRRLDQIKHPFNSHPFEAVAFGSWQAVEFIKIKAGTMSIHFVDNHYVTMEKGPLSD
IRIRSRKATLSDCSRFLRPGIDICVLSAPQQSNDSDAVVMDPVWLDAKISSVQRKPHDSE
CSCQFYVNFYVHQGSLGAELRTLSKEIKVVGIKQISILQKLDNIACEDQHYRWASSEDCS
MISHTKLLLGKVLCDLSWLVVTSALKKISFCLRCLEEKLVYQILGRDSDNSSLNRDFHID
VVNFKTESGSIIPFVSQVATPITKMIDHVQESHEDKLLLSYDVEGLRRSKRRNVQPERYI
GSVNVSSEIDVGSFRNRPPVKIDTWKEEEDEELHIPLACLFGLQKSTPEGVNENHQKEAS
TCRELVMHKRRMTAKQKVKSGENYHNEDQNRLAIVPLPDQDDPLLVEHCDDFDEKVARSY
RHESSEHYSKYYDLTSTPNKSKKKGDKLLAFENNNHPAKSDDVEKTDDDLSLRYHYSYGV
PKSKRKNLSGLDDIVDLGNKWEGIRSNKEVQKKKYHASYSRSRDHGEEKRYKYKDRTLNA
AAYKDLINSYLKNINTISTQEEPSITDQWKENNTTSSIGQKTETEMPDEEDAEEVSEMDM
LWRELEVSLASCYLEEDSNAATVTETVEIANRGCPHDFRMNEEIGIYCYRCGFVKTEIKY
ITPPFIQHSSWHQEERHSAEEDSRTKVDEDDDLDLFPALESPEGPVSQENDNVWALIPEL
RTKLHAHQKKAFEFLWQNIAGSMEPRLMEAASKRIGGCVVSHTPGAGKTFLIIAFLVSYL
KLFPGKRPLVLAPKTTLYTWYKEFIKWDIPIPVYLIHGRRTYRVFKQKSPVVLPGVPKPT
DDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKYMAKVLRESPGILVLD
EGHNPRSTKSRLRKALMKVQTKLRILLSGTLFQNNFCEYFNTLCLARPKFIHEVLKALDS
KYKRKGKVAKKASHLLESRARKFFLDKIAKKIDSDKGRERQQGLKMLRNVTNGFIDVYEG
GSSDGLPGLQIYTLLMNSTDTQHEILLKLHKKMAKCNGYPLELELMITLGSIHPWLVKTA
VCAEKFFTSEQLMELEKCKFDLKIGSKVRFVLSLIYRVVKNEKVLIFCHNIAPVKLFVEY
FEKYFGWLRGREVLVLTGELELFERGRVMDKFEEAGGVAKVLIASITACAEGISLTAASR
VIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFS
EAFVEDPSQWQAEKIEDDILREMVAEDSSKSFHMIMKNEKASSTNK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacagaaaaagacggttagatcaaatcaagcatccattcaattctcaccccttt
gaagccgttgcctttggatcatggcaagctgtggagttcataaagattaaggcaggaact
atgtctatacattttgtagataatcattatgttactatggagaaaggacccttgtcagac
attcggataaggtcaaggaaagctactttatctgattgctcccgttttctgcgacctgga
attgacatatgtgtgctatctgcccctcaacaatctaatgattcagatgcagttgttatg
gaccctgtttggttggatgctaaaataagctctgtacaaagaaaacctcatgactctgag
tgctcctgtcagttttatgtcaatttctatgttcatcaaggttcacttggtgcagagtta
agaactctgagcaaggagattaaagttgttggaatcaaacaaatatccattctccaaaaa
cttgacaatattgcttgtgaagatcagcactatcggtgggcatcatctgaggactgttcc
atgatatcacatactaaattacttttgggcaaagtgttatgtgatctttcatggttagtt
gttacctctgctttaaagaagatttccttttgtctaagatgtctagaagaaaagctagtg
tatcaaattttgggaagagacagtgataacagttcattgaatagagattttcacattgat
gttgtgaatttcaaaacagaaagtggctcgataataccctttgtttctcaagtagctaca
cctataactaagatgattgatcacgtacaggaatcccatgaagataaattattgctatct
tatgatgttgagggcttgcggcgttctaagcgtaggaatgtacaaccagaacgttacatt
ggtagtgttaatgtttcttctgagattgatgttggttctttcagaaacagaccaccagtg
aagatagacacatggaaagaagaggaggatgaagaactgcatataccattagcatgcctg
tttggtttgcagaagagcactccagaaggggttaatgaaaatcatcaaaaggaggcaagc
acctgccgggagcttgtgatgcataagaggagaatgactgctaagcagaaggtaaagtca
ggagaaaattatcataatgaagatcaaaatcgtcttgctattgttcctcttcccgatcaa
gatgatccattacttgttgagcattgtgatgatttcgatgaaaaggttgctagaagttat
cgtcatgaatcctctgaacattattccaaatattatgatctaactagtactcccaataaa
tcgaagaagaaaggtgataaattgttagcttttgagaataataatcatcctgctaagtca
gatgatgtagaaaagactgatgatgatttgtcattgagatatcattatagttatggtgtc
ccaaagtcaaagaggaagaatttaagtggtttagatgatatagtagatcttggaaataaa
tgggaagggattagatccaacaaagaagttcaaaagaaaaaataccatgcatcttattca
agaagtagagatcatggagaagaaaaaaggtacaaatataaagacagaaccttaaatgca
gctgcctacaaggatttgataaattcgtacttaaagaatattaatacaatatctactcaa
gaagaaccatctatcactgatcagtggaaggaaaacaatacaactagtagcattgggcaa
aagacagaaacagaaatgcctgatgaagaggatgcagaagaagtatctgaaatggatatg
ttgtggagagaactggaagtgtcattggcatcatgctatctagaagaggattcaaatgct
gctactgtcactgagactgtggaaatcgcgaaccgaggctgcccacatgatttcagaatg
aatgaggaaattggaatttactgctatagatgtggctttgtgaaaactgagatcaaatat
attacgccaccctttattcaacattcttcatggcaccaagaggagaggcacagtgctgaa
gaagattcacgaacaaaggttgatgaggatgatgacttggatcttttccctgccctagaa
tctcctgagggacctgtgtctcaagaaaatgataacgtttgggcattgattcccgaactt
agaacaaagttgcatgctcatcagaagaaagcctttgagtttctttggcaaaacattgca
gggtcaatggaacccagactcatggaagcagcatccaaaagaataggtggctgtgtggta
tctcatactcctggtgctggaaaaacttttctcatcattgcttttcttgtgagctacttg
aagttattcccagggaagagacctcttgttcttgctccaaaaacaaccctctatacttgg
tacaaagaatttatcaagtgggatattcctataccagtgtatctgattcatggacgtaga
acataccgggtattcaagcagaaatcaccggttgttcttcctggagttcccaagcccact
gatgatgtcaagcatgttttggattgccttgagaagatacaaaaatggcattcacacccg
agtgttctgataatgggttatacttcatttttaacattgatgcgtgaggattcaaagttt
gcacacagaaaatacatggccaaagtgctgagggaaagcccggggatcttggttctggat
gaagggcataaccccagaagcactaaatcaaggttgagaaaggctctgatgaaagttcaa
acaaaattgagaatactgctttctggtacattgtttcagaacaatttctgtgaatacttc
aacactctgtgcttggcaagaccaaagttcattcatgaagtactgaaagcattagactcc
aaatacaaaaggaaaggaaaagtggcgaaaaaggcaagtcatttattagagtcacgggcc
agaaaattcttcttagacaaaattgctaagaagattgactctgataaaggtagggagagg
cagcagggtctaaagatgttgagaaatgtaacaaatggattcatagatgtttatgaaggt
gggagctctgacggtctacctggtttacaaatttatacactgttaatgaattcaacagat
acacagcatgaaattttgcttaaactacacaagaaaatggcgaagtgcaatggttaccct
ctggagttagagcttatgataactcttggttcaatacatccctggctggtgaaaacagca
gtgtgtgctgagaagtttttcacttctgagcaattgatggagctagaaaaatgcaaattt
gacctgaaaatagggtcgaaggtaagatttgttttgagccttatctaccgtgttgtgaaa
aacgagaaggttctgatattttgccacaacattgcaccagtgaagctatttgtggaatat
tttgagaagtattttggatggctaagaggtagagaagtgttggtactaactggggaatta
gaactgtttgaaagagggagagtaatggacaagtttgaggaagctggtggagtagcaaaa
gtacttattgcttctattacagcttgtgctgaaggcattagtttgacagcagcttcacga
gttattatgttggattcagagtggaatccttcaaaaacgaagcaagccattgctcgggca
tttcggcctggtcagcagaaagttgtttatgtgtatcagcttttagtcacaggttcattg
gaggaagataagtacagaagaaccacttggaaagaatgggtttcaagcatgatcttcagt
gaggcctttgtggaagacccttctcagtggcaagctgagaagattgaagatgatatactc
agagaaatggttgctgaagatagttctaaatcattccacatgatcatgaagaatgaaaaa
gcttcttctaccaacaaataa
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