KEGG   Vigna radiata (mung bean): 106765733
Entry
106765733         CDS       T04126                                 
Name
(RefSeq) WD repeat-containing protein VIP3
  KO
K12602  WD repeat-containing protein 61
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106765733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106765733
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     106765733
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_Aladin NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_VPS8 Cytochrom_D1 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_WDR11_1st Beta-prop_HPS5 Tricorn_2nd CFAP43_N PROPPIN Nbas_N WDR54 Beta-prop_pof12 PD40 Beta-prop_LRRK2 Beta-prop_WDR11_2nd Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 106765733
NCBI-ProteinID: XP_014505934
UniProt: A0A1S3UJ10
LinkDB
Position
7:46214436..46217517
AA seq 321 aa
MKLGGIKSVENAHDDSVWAVTWVPATANRPPLLLTGSLDETVRLWRSDDLLLDRTNTGHC
LGVASVAAHPLGSLAASSSLDSFVRVFDVDSNATVATLEAPPSEVWQMRFDPKGSILAVA
GGGSASVKLWDTSTWELVATLSIPRPEGPKPTDKSGSKKFVLSVAWSPDGKRLACGSMDG
TISVFDVPRGKFLHHLEGHFMAVRSLVYSPYDPRVLFTASDDGNIHMYDAEGKALVGTMS
GHASWVLCVDVSPDGAAIASGSSDRSVRLWDLSMRASVQTMSNHTDQVWGVAFRPPGGSD
ARGARLASVSDDKTISLYDYS
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaaactgggtggaatcaaatcggtggagaacgcgcacgatgattccgtgtgggcggtc
acatgggtacccgcaaccgccaaccgcccaccgctcctcctaaccggttccctcgacgag
accgtcaggctctggcgctccgacgacctccttttggaccgcaccaacaccggccactgc
cttggcgtcgcctccgtcgctgcccaccctctaggctccctcgccgcctcatcttccctc
gacagcttcgtccgcgtcttcgatgtggattccaatgccaccgtcgccaccctcgaggcc
cctccctccgaagtctggcaaatgcgcttcgatcccaagggttctattctagcagttgct
ggtgggggtagtgcatcagtcaagctttgggacacttcaacatgggaacttgttgccacc
ttatcaattccccgtccagaaggacccaagcccacagacaagagtggtagcaagaaattt
gtgctgtcagttgcatggagtcctgatgggaagcgacttgcttgtggttcgatggatggc
accatttctgtttttgatgttccacgtggaaaatttttacatcaccttgaaggtcacttc
atggccgtgcggtctcttgtttattctccttatgatccaagggtactgtttacagcatcg
gacgatggtaacatccacatgtatgatgccgaggggaaagctttagttgggaccatgtca
ggtcacgctagttgggtactttgtgtggatgtgagcccagatggggcggccattgcctca
ggttcaagtgatagatcggtaaggctatgggatcttagcatgagggcatctgtgcagaca
atgagcaaccatacagaccaggtatggggagtagcttttagaccacctggggggagtgat
gcgcgaggtgctcgtcttgctagtgtatctgatgacaagaccatttcactttatgattat
tcctga

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