Vigna radiata (mung bean): 106766468
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Entry
106766468 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106766468
03041 Spliceosome [BR:
vra03041
]
106766468
03036 Chromosome and associated proteins [BR:
vra03036
]
106766468
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106766468
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106766468
mRNA cycle factors
Common to processing body (P body) and stress granule
106766468
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106766468
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106766468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106766468
NCBI-ProteinID:
XP_014506680
UniProt:
A0A1S3UKY4
LinkDB
All DBs
Position
7:42395327..42398625
Genome browser
AA seq
669 aa
AA seq
DB search
MSFSSALHPSFSDPLCYISTHSNPSIIILTTTLYSLLLLPNQNSSSSSSLSFFKQPFTMP
WSYASPYVPPHHNSNYIPPSDDPAHNGFSRAAAPRPGPWQRGASAGRGFSRPRDPSHRNS
RFPVEEQENGDAINFDAYESVPVEASGKDVPPPVNVFDDTDLDEGLKRNIKRCKYVKPTP
VQRHAIPIATAGRDLMACAQTGSGKTAAFCFPIISGILKGRSSSGFAPVSRGVAVAYPTA
LILSPTRELSCQIRDEANKFAFQTGVKVVVAYGGSPIIQQLRLLEKGVDILVATPGRLVD
IIERERVSLARIKYLALDEADRMLDMGFEHQIRKIVEKMHMPPPGIRQTLLFSATFPNDI
QKLASDFLSDYIFLSVGRVGSSTELIVQKIELVQDTDKRDKLVAHLRSQKVHGTNGKHAL
TLVFVETKRGADALESWLSKSGFPAIAIHGDKVQLERERALRSFKSGHTPILVATDVASR
GLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGKSGLATAFFSDKNSPMAKALVGLLQEA
NQEVPSWLNQFAECSSSGGRGRGYGSQRYSSGSYGGRDFRNPTEPEVQSYNCYGSHGNAD
NGVESFSTTSYVDTSYDMQNYPVETSFENLNISCSYDEGDGNSVEPCGGVTVGEEGPSGY
ASIVPTGWD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcttctgcacttcacccgtcgttttcagacccactctgctatataagcacc
cattcaaacccttccattattattcttactactactctctactctctactgctactacca
aaccaaaactcctcctcttcttcctccctttcattctttaaacaaccctttaccatgccc
tggtcttatgcttccccctatgtgcctccgcatcacaactctaactacattccaccttct
gatgatcctgcacacaacggattttcccgtgctgccgctccccgtcctggaccctggcaa
cgcggcgccagcgccggccgtggattctctcgcccccgtgacccttctcaccggaactca
cgcttccccgtggaggaacaagaaaatggcgacgctattaactttgacgcgtacgagtct
gtcccggtggaggcgagtgggaaggacgtgcccccgccggtgaacgtcttcgacgatacg
gacttggacgaagggttgaagaggaatatcaagcgatgcaagtacgtgaaacccacgccc
gttcagcgtcacgcgattcccatagctaccgcgggccgtgacctcatggcgtgtgcacag
accgggtcggggaaaacggcggcgttttgctttcccatcatatctgggattttgaagggt
cgctcctcttctgggtttgcgcctgtatctcgtggtgtcgctgttgcgtaccccactgcg
cttattttgtctcctacgagggagttatcttgccagatacgcgatgaagcgaacaaattt
gcatttcaaactggagttaaggttgttgttgcctatggtgggtctcctatcattcagcag
ctgcgccttctggagaagggggttgacatattagttgccactcctgggcgcttggtggat
attattgaaagagaaagggtttcgttggcgaggattaagtaccttgcattagacgaagct
gatcgtatgctggatatgggtttcgagcatcaaatacgcaagattgtggagaaaatgcac
atgccaccgccaggtatcagacagacattgttgtttagtgcaacgttccctaatgatata
cagaagctagcttcggactttttgtcggactacatattcctgtctgttgggagagttgga
tcgagtactgaactgattgtgcagaagattgagcttgtacaggatacagacaaaagagac
aaacttgttgctcatcttcgtagccaaaaggtgcatgggaccaatgggaagcatgctttg
actcttgtatttgttgaaacaaaaagaggagcagatgctttagaaagctggttatcgaaa
agtggctttccagctattgccatacacggagacaaagttcaattggaaagggaacgggct
ttaaggtcttttaaatctggacatactcctattttggttgcaaccgatgttgcttcgagg
ggattggatatcccgcatgtggctcatgtcataaactttgacttgcctagagacatagat
gactatgtacacagaattggacgaacaggccgtgcaggtaaatctggtttagccactgct
ttcttcagcgacaagaacagtccaatggcaaaggctcttgttggattgttgcaggaggca
aaccaagaagttccttcttggctcaaccagtttgcagagtgttcctcctcaggtgggcgt
ggtcgtggttatggatcacagcgttacagcagtggtagctatggtggtcgtgattttcga
aatcccactgaacctgaggtgcaaagctacaactgctacggttctcatggcaatgcagat
aatggtgtagaatcttttagtacaacctcatacgttgatacctcgtacgacatgcaaaac
taccctgtagaaacctcttttgagaatttgaatataagttgcagttacgatgaaggtgat
ggtaactctgttgaaccgtgtggaggtgtaacggttggtgaagaggggcctagtggttat
gcatctattgttcccactggatgggactag
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