Vigna radiata (mung bean): 106768408
Help
Entry
106768408 CDS
T04126
Name
(RefSeq) polyadenylate-binding protein 8
KO
K13126
polyadenylate-binding protein
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106768408
09123 Folding, sorting and degradation
03018 RNA degradation
106768408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106768408
03041 Spliceosome [BR:
vra03041
]
106768408
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106768408
mRNA cycle factors
Stress granule specific factors
106768408
Spliceosome [BR:
vra03041
]
Complex C
Other components
Complex C specific factors
106768408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_Nup35
RRM_7
RRM_RdRP1_2
RRM_MARF1
PABC_AtC3H46
DUF5062
PH_35
Motif
Other DBs
NCBI-GeneID:
106768408
NCBI-ProteinID:
XP_014509042
UniProt:
A0A1S3USU0
LinkDB
All DBs
Position
7:complement(7606798..7611842)
Genome browser
AA seq
651 aa
AA seq
DB search
MAQVQVQPQNAMPGPNGAAAAAAAGGNQFVTTSLYVGDLDPNVTDSQLYDLFSQLGQVVS
VRVCRDLTSRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGAG
NIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKL
NGMLLNDKQVYVGPFLRKQERESAIDKAKFNNVFVKNLADSTSDDELKTIFGEFGTITSA
VVMRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRF
EQSMKEAADKYQGANLYVKNLDDSISDDKLKEMFSPFGTITSCKVMRDPNGVSRGSGFVA
FSTPEEASRALSEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVP
MYPPGGPGIGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQG
QRPGGRRAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGIPDVPMPGVAGGMFSVPYDVGGM
PLRDASLSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
TEVLHLLESPEALKAKVAEAMDVLRNVAQQQQAGSAADQLASLSLNDNLVS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggttcagcctcagaatgcgatgcccggtcccaacggtgctgctgct
gctgctgctgctggaggaaaccagttcgtgacgacatcgctttacgtcggagatctcgac
cccaacgtgacggactcacagctttatgatctgttcagtcaattgggccaagttgtgtct
gttagggtttgcagggacttgaccagccgaagatcgctcggttacggctatgtcaactat
agcaaccctcaagatgctgctagagcattagatgttctgaatttcactcctctcaacaac
aagcccatccgtattatgtattcacatcgtgatcccagtatccggaaaagtggggcagga
aatatttttatcaagaatttggatagggcaattgaccacaaggcattacatgataccttc
tctacatttgggaatatcctttcatgcaaggtagcaacggattcatctgggcaatcaaaa
ggatatggctttgttcagtttgataatgaggaatctgcccaaaaagccatagagaagctg
aatggtatgctgttgaatgataagcaagtgtatgtgggacccttccttcgcaagcaagag
agagagagtgctattgacaaggcaaaattcaataatgtttttgtaaagaatctagcagat
tcgactagtgatgatgaattgaagacaatttttggtgaatttggaactattactagtgct
gtagtgatgagggatggagatgggaaatcaaagtgctttgggtttgtgaattttgagaat
gctgatgatgctgctagggctgttgaggctctcaatggcaaaaaatttgatgataaggaa
tggtatgttggaaaagcacagaagaaatctgaaagggagaatgaattgaaacaacgattt
gagcagagcatgaaagaagctgctgataaatatcaaggggcaaacttgtatgtcaaaaat
ttggatgatagcattagtgatgataaacttaaggagatgttctccccttttggtaccatc
acctcttgcaaggttatgagggacccaaatggcgttagtcgtggatctggatttgtggca
ttctcaactcctgaggaggcatctagagcactctctgagatgaatggcaaaatggtggta
agtaaacctctgtatgtgactctagcccaaaggaaagaagatagaagagctagactgcag
gctcagtttgcccaaatgcgacctgttggaatgccaccatctgttggtcctcgagtgcca
atgtatcctccaggtggtccaggtattggtcaacaaatattttatggccaaggccctcct
gctatcattccttcccagcccggatttggttaccaacaacaacttgtgcctggtatgagg
ccaggtgcagctcctgtgccaaatttctttgtgccaatggttcagcagggacaacagggt
cagcgccctggtggaaggcgtgcagtccagcagtcgcagcagccagttccaatgatgcca
cagcagatgcttcctaggggacgtgtctatcgatatcctcctggcaggggcattcctgat
gttcctatgcctggggttgctgggggtatgttttctgttccatatgatgtgggtgggatg
ccacttcgtgatgcatcactctcccagcaaattcctattggggctttggcatcggctctt
gctaatgcttctccagagcagcagaggacgatgctgggtgagaatctttacccccttgtg
gagcagttagagcctgataatgctgcaaaagtcacaggcatgcttcttgagatggaccag
actgaagttctgcatttgctcgagtcaccagaagcgctgaaagcaaaggtggctgaggcg
atggatgtcctaaggaatgttgcccagcagcagcaggctggcagtgctgctgatcagctg
gcttctttatcacttaatgacaaccttgtttcttaa
DBGET
integrated database retrieval system
