Vigna radiata (mung bean): 106768486
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Entry
106768486 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106768486
03041 Spliceosome [BR:
vra03041
]
106768486
03036 Chromosome and associated proteins [BR:
vra03036
]
106768486
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106768486
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106768486
mRNA cycle factors
Common to processing body (P body) and stress granule
106768486
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106768486
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106768486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
106768486
NCBI-ProteinID:
XP_014509151
UniProt:
A0A1S3USU2
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Position
7:complement(38218480..38227642)
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AA seq
616 aa
AA seq
DB search
MRTSWADLAANSAAENSGPAFSANNAGTGSTVAPSRPVYVPPHLRNRQPSAEAPVPAPAP
AYSGPSSGSVGSSAAGNSGSRWPAPRNDHRSGYGGGGGRPGGWGNRSGGWDRGREVNPFE
EEDNAEEAFNEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRCKYV
KPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPL
ALVLSPTRELSMQIHEEARKFSFQTGVKVVVAYGGAPINQQLRDLERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKE
IQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQA
LTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALADLMQE
ANQEVPAWLSRYAARSYGGGRNRRSGGRFGSRDFRREGSFNRGSSDYYSAGNSSGGYGGS
GGYAGGYGPGVTSAWD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgcaaattctgcagctgaaaattcgggtcccgct
ttttctgctaacaatgcgggaactggtagtactgtagctccttcacgaccagtttatgtt
cctcctcatcttaggaaccgccagccatcagcggaagccccagtcccagccccagcccca
gcatacagtggtccttcttctggttctgttggctctagtgctgctggtaattctggatcc
cgttggcctgcacccagaaacgatcatcgttctgggtatggtggtggtggtggacgccca
ggtggatggggaaatagaagtggtgggtgggatcgtggcagggaagtcaacccctttgaa
gaagaggataatgctgaagaggcatttaatgagcaggagaatacaggaataaattttgat
gcatatgaggacattccggtagagaccagtggtgaaaatgtgcccccacctgtgaataca
tttgcagagattgacttgggtgatgcacttaatcagaatataagaaggtgcaaatatgtg
aagccaacacctgttcagcggcatgccataccaatatccctaggtggacgggatttgatg
gcttgtgcacagactggttctggaaagacagctgcattctgtttcccgatcatcagtgga
attatgaggggccaacctgtccagaggccacctcgtggggtgcgtactgtgtatccactt
gcgcttgttctctctccaacgagggagctatcaatgcaaatacatgaagaggctaggaag
ttttcattccaaactggtgttaaggtggttgttgcttatggtggagcaccaataaatcag
cagctgcgggatcttgagagaggggtggacattcttgttgcaactcctggaagactggta
gatttgctggagagagctagagtttcactgcagatgattcgatatctggccttagatgag
gcagatcggatgctagatatgggttttgagccacaaataaggaagattgtagaacaaatg
gacatgcctccaccaggtgttagacagactatgttgttcagtgcaacatttccgaaagag
atacagagactggcttctgattttctttcaaattatattttcctggctgttggaagagtg
ggttcaagtactgatttaattgtccaaagagttgagtacgttcaagagtctgacaagaga
agtcacctaatggaccttcttcatgcacagagggcaaatggtgtacagggaaagcaagct
ttgactttagtttttgtggagacaaagaagggagctgattcactggaacactggttgtgt
cttaatggttttcctgcaactactattcatggtgataggtcgcagcaggaaagagaatta
gcattgaggtcttttaaaagtggcaacacccccatattggttgctaccgatgttgctgca
cgtggtcttgatatcccccatgttgctcatgtagtcaactttgacctgccaaatgatatt
gatgattatgtacaccggattggaagaacagggcgagctggaaagaaaggccttgcaact
gcattctttaatgataacaattcatcactagctagagctttagcagatctgatgcaagaa
gcaaatcaagaagtacctgcttggctctctcggtatgctgctcggtcttatggtggaggg
agaaaccgccgatcaggtggtcggtttggtagtcgagactttcggagagagggctcgttt
aacaggggttcttcagattactacagtgcaggaaacagcagtggtggatatggaggttct
ggtggatatgctggagggtatggtccaggcgtcactagtgcctgggactga
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