Vigna radiata (mung bean): 106769265
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Entry
106769265 CDS
T04126
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106769265
03015 mRNA surveillance pathway
106769265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106769265
03041 Spliceosome [BR:
vra03041
]
106769265
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106769265
Spliceosome [BR:
vra03041
]
Complex C
Other components
EJC/TREX
106769265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF5520
Patatin
Motif
Other DBs
NCBI-GeneID:
106769265
NCBI-ProteinID:
XP_014510288
UniProt:
A0A1S3UW18
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Position
7:41417165..41421385
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AA seq
424 aa
AA seq
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MGSTAVEKTEEVLRSEIDELLRQQREITERLRDPRGLRRGALAGPALRTNGGVRQRPFVR
SGDRNDSEDQPPAKRRLSSTVVKVDDGELPEDADAGQDGKEKDSAIEGVNGTGAVVQSDR
NLFNSHQSGWSKRDGNQRTSKVSDIPAEHVPRILPKNEDPSLVNRNKRMLGQLLGTLEKF
RKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRKEEREQIAEKRRRDLTLRARVAAKT
EEKKLELLFLRWSEHHKRLSNFIRTKAEPPIYYLPNKPLDEDPAALEKRKEEAFLEWKNA
RREEVSEYQKQIGEQYLTNVEKELERWHNARNARKANNDQNLQETMDKELDTHRLEHGPK
KRKIPDGNNNEDDDDVEDINVGEDDMMDDELDDDSGRRIDETTKLEAGNAIADPAADADN
VEGK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacggcggtggagaagacggaggaggtactccgcagcgagatcgatgagctt
cttcgccaacaacgcgagattacggagaggcttcgagatcctcgaggtcttcgcagaggt
gccttggcggggcctgctcttcgaactaatggtggtgttcgccaaagacccttcgttcgc
tctggagacaggaatgattccgaagatcaacctcctgcgaaacgtcggctttcatccact
gtggttaaggttgatgatggcgagttgcctgaagatgctgatgcaggacaggatggaaag
gaaaaggattcagctattgaaggtgtgaatgggaccggtgcagtggttcagagtgatagg
aaccttttcaattctcaccaaagtggatggtctaagagagatggcaatcaaagaacttcc
aaggtttctgatatccccgcagaacatgttccaaggatactgccaaagaatgaggatccc
agtttggtaaataggaataaaagaatgttgggccagcttctgggaactctggagaaattc
cgaaaggaagacatgcaactctccggaacagaggcatatatgcgaagatccaattccttg
caaagagcggagcaaagggcacgtgaagaaagtgaaaggcttaggaaagaagagcgtgaa
cagattgctgaaaaacgaaggagagacttgacccttagggctcgtgtggctgctaagaca
gaagaaaagaaattggagttgctatttcttcgctggagtgagcatcataaaagactaagc
aattttataaggactaaagcagaacctccaatctactatttgcctaacaagcccttggat
gaagatccagcggcacttgagaagcgcaaagaagaggcattcctagaatggaagaatgca
agaagagaggaagtgtctgagtaccagaaacagattggggagcagtaccttaccaatgtt
gagaaggaattggagagatggcataatgcaaggaacgcaaggaaagcgaacaatgaccag
aatttacaggagactatggacaaagagttggatacacacaggctggagcatggtcccaag
aaaagaaagatcccagatggaaacaataatgaagatgatgatgatgtggaagatataaat
gtgggagaggatgacatgatggatgatgaattagacgatgactctggtaggaggattgat
gaaacaacaaagttggaagctggtaacgccattgcagatcctgcagctgatgccgacaat
gtggaagggaagtga
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