Vigna radiata (mung bean): 106769568
Help
Entry
106769568 CDS
T04126
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vra03016
]
106769568
Enzymes [BR:
vra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106769568
Transfer RNA biogenesis [BR:
vra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106769568
Prokaryotic type
106769568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF7261
TetR_C_2
Motif
Other DBs
NCBI-GeneID:
106769568
NCBI-ProteinID:
XP_014510724
UniProt:
A0A1S3UXV8
LinkDB
All DBs
Position
7:43819119..43822262
Genome browser
AA seq
573 aa
AA seq
DB search
MENPDTALTTSSLPPPPPLAADEPEPKKLKMSTTTSDDEECKTAPGTKKRYKRRKVAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDP
SCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVDAGISSNRDV
VLDSVVAEDVEVSLSRGDDDHLNGESGIDTKGEVLVDSTDPETGIENVIPVQDEDMPLNG
ESVNNSDIVEEEKMNGVDKSTGGSRFCYGEKERERFNKILNFFVGTHNFHNFTTRTKAQD
PAARRYIISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINK
ALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEVVSMKAYEKEAEEFKMKYIYSHI
SSTEQKEGTVALWLHSLNHRNYPDLHVVNEEAITDNKSADPEEAISDYKTANPETDNKSA
DCEEAITDNNSVDPEQAITDNKSAADPEVVVTE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccagatacagcgctgacaacttcatccctgcctccaccacctccattagct
gcggacgagccagagcccaagaagctgaagatgtccaccacaacttctgatgatgaagaa
tgcaaaactgcccctggcaccaagaaacgatacaaacgccgtaaggttgccattttcttt
gcttattgtggtgttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaa
ggtgacctagaagaggccttatatgtgtctggagctgttcctgaacatgatcgtggaatt
cctaaacgatatgactgggctcgctcagctagaacagataaaggtgttagtgctgttggt
caggttgtctccggtcgtttctacattgatcctcctggttttgttgaccgccttaattca
aaccttccctctcagataaggatctttggttacaagcgtgtgacaggttcttttaatgcc
aagaagttctgtgaccggaggaggtatgtctatctcattcctgtgtttgctcttgatcca
agttgtcaccgtgatagagagactgtcatggctagtttgggatctacaaacgagcttgtt
aaatgtttggagtgttctgagagaggccgaaaggtggtaggattagttggcaaccgtaag
cacaatctggaactcgaagccatggatgttgacgctggtatttcatcaaacagagatgtt
gtgcttgattctgtagttgcagaggatgtggaagtttctctgagcagaggggacgatgat
catttaaatggggagtctgggattgatactaagggtgaagttttagttgatagcacggac
cctgaaactggtattgagaacgtgattcctgttcaggatgaggatatgcctttgaacggt
gaatctgtgaataattcagacattgttgaggaagaaaaaatgaatggagtggataagtct
actggtggaagtaggttctgttacggtgagaaggagagggagagatttaataagatttta
aatttttttgttgggactcacaatttccataacttcaccacccgaacaaaagcacaggac
cctgctgctcgtcgttacattatttcattcaatgctaacactactgttgtagttgagggc
attgagtttgtaaagtgtgaggttgtgggacagagcttcatgcttcatcagatacggaag
atgatggggctggcagtggcaataatgagaaattgtgcaccagaatcacttatcaataaa
gctttgcagcaggatgtgaacattaatgtgcctactgctcctgaggttggattatatctg
gacgaatgcttcttttcttcatataaccagaagtggaaagatagccatgaagtggtttca
atgaaagcatatgagaaagaagctgaggagttcaaaatgaagtacatatattcccatatt
tcttcaacggagcagaaggaaggaactgttgctctttggttgcattctttaaaccataga
aattatcccgatctgcatgttgtcaatgaggaagccatcactgataacaagagtgctgat
cctgaagaagccatttctgattacaagactgctaatcctgaaactgataacaagagtgct
gattgtgaagaagccatcactgataacaatagtgttgatcctgaacaagccattactgat
aacaagagtgctgctgatcctgaagtagtagtaaccgagtga
DBGET
integrated database retrieval system
