Vigna radiata (mung bean): 106769644
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Entry
106769644 CDS
T04126
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106769644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106769644
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106769644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR41
WD40_RFWD3
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
106769644
NCBI-ProteinID:
XP_014510836
UniProt:
A0A1S3UXM8
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All DBs
Position
8:4419247..4424926
Genome browser
AA seq
566 aa
AA seq
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MEVEKENVTAEPSLPASDGQDTISDNASLPHSIQPIIPPVIPPSVVPPLAPIPTIPPPRP
LAPLPVRPPVIRPPVPQNGEVRSSDSDSDNDDSNARINQGTGEYEISEESRLVRERQEKA
MQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDAEGQL
EKLMKAHEDEEAAASAPKDEAEEELQYPFYTEGSKALLDARIYIAKYSLARAALRIQRAQ
RRRDDPDEDMDAEIDWALRQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLTGASKL
WNMPKIKKHSTLKGHTERATDVAFSPVHDHLATASADRTAKYWNDQGSLLKTFEGHLDRL
ARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHRDGSLAASCGLD
SLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIP
AHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGH
IVTVSHDRTIKLWSSNTTNEQAMDVD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagaaggaaaatgttactgcagagccatctttacccgcctctgatggtcaa
gatactatttctgataatgcatctctaccccattcaatacaacctattattccacctgtt
attccaccttctgttgtgcctcctttagctccaattcccacaattcctccccctcgccca
ctggcaccacttccagttcggccaccagtcattaggccacctgtgccacaaaatggtgag
gttagatcaagtgactctgactcggacaatgatgactcaaatgcaagaattaaccagggg
actggggagtatgagatatctgaagagagtagactggtgagagagcggcaggaaaaggca
atgcaggaactcatgatgaagaggcgggcagctgctcttgccgttcctacaaatgatatg
gctgtgcgagctcggcttcggcatcttggtgagccaataactctatttggtgagagagag
atggagaggcgggacaggttgcggatgattatggcaaagctggatgcagaaggtcagctg
gagaagctgatgaaagctcatgaggacgaagaggctgcggcttctgctccaaaagacgag
gctgaggaagaactgcagtatcctttttacactgaaggatcaaaggctctcctggatgcc
agaatttatattgctaaatattctttggcaagggcagcattacggattcaacgtgcacag
agaagaagggatgatccagatgaagatatggatgcagagatagattgggcattgagacag
gctgggaatttgagtctcgaattcagtgaaattggagatgatcggcccctttctggttgc
tccttctcaagggatggaaaatggcttgccacctgttctctgactggcgcttccaagttg
tggaacatgcccaaaataaaaaaacattccaccttgaaggggcacacagaacgtgctaca
gatgttgctttttctcctgttcatgatcatttagcaactgcctctgctgatagaacagca
aagtattggaacgatcaaggatcacttttgaagacatttgagggtcatctggaccgtctt
gcccgcattgccttccatccttcagggaagtacctgggaactgccagttttgacaagaca
tggagattatgggacatagaaacaggggaggagttgcttcttcaagaaggacatagtaga
agtgtgtatggcctggctttccaccgcgatggatcattagctgcatcttgtggactagac
tctctggctcgtgtttgggacctgcgaactggaagaagtattcttgcactggaaggtcat
gtcaaaccggttcttggcattagtttttcacctaatggatatcatctagccactggtggt
gaagacaacacgtgtcggatttgggatttgaggaagaagaaatccttttatactattcct
gctcactcgaatttaatatcacaagttaaatttgaaccacaagaaggttactttttggta
actgcctcatatgacatgactgctaaggtttggtcgggccgtgactttaagcctgtgaag
acactatctgggcatgaagcaaaagttacctctgtggatgttcttggagatggtggccac
attgttaccgtctcccatgatcgcacaataaaactgtggtccagcaatacgaccaacgaa
caagcaatggatgttgattaa
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