Vigna radiata (mung bean): 106770907
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Entry
106770907 CDS
T04126
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106770907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106770907
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106770907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_16
TPR_2
ANAPC16
TPR_11
Motif
Other DBs
NCBI-GeneID:
106770907
NCBI-ProteinID:
XP_014512243
UniProt:
A0A1S3V1M8
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Position
1:13112650..13158905
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AA seq
738 aa
AA seq
DB search
MEKTSGADKYNIETAEILANEAQHLPVAEATPIYEQLLLLFPTAAKFWRQYVEAYMATNN
DDATKQIFSRCLLHCLQIPLWRCYIRFIRKVNDKKGMEGQEETRKAFDFMLNCVGADIAS
GPVWMEYIAFLKSLPAINGQEESHRMTNVRKVYQKAIVTPTHHIEQLWKDYENFENSVSR
QLAKGLISEYQPKYNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEMQWIAWKRLLSFE
KGNPQRIDTASSNKRIIFTYEQCLMYMYHYPDIWYDYATWHAKGGSIDAAIKVFQRALKA
LPDSEMLRYACAELEESRGAIQAAKKIYESLLGDGVNATSLSHIQFMRFLRRTEGVEAAR
KYFLDARKSPSCTYHVYVAYATMAFCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFLI
RMNDDQNIRALFERALSSLPPEESVEVWKKFTQFEQTYGDLASMLKVEQRRKEALSGAED
GTALESSLQDIVSRYSFMDLWPCSSNDLDHLARQEWLTKNINKKVEKCILANGTILIDKT
SMTNISTTSPKIVYPDTSKMVIYDPKHTPGAGAGTNAFDEILKATPPALVAFLANLPAVE
GPTPNVDIVLSICLQSDLPTGQSAKTGISTQVQTGKVGIPSQLPGGYAPATSELSGSSKS
HPVPSGVSLKPGSNRQYGKRKESDKQEDDDTTTVQSQPLPRDAFRIRQYQKARASSASQT
GSVSYGSAFSGDLSGSTG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaccagtggcgcagacaagtacaacattgaaaccgcggaaatcttggcaaat
gaggctcagcatttgcctgttgcagaggccacacccatatacgagcagcttctgctattg
tttccaactgctgccaagttttggaggcaatatgtggaggcatacatggctacaaataat
gatgatgctacaaaacagatttttagtcggtgtttgttgcattgtcttcagattcctcta
tggagatgctacattcgtttcattagaaaggtcaatgacaagaagggcatggagggtcag
gaagagacaagaaaagcttttgattttatgcttaactgtgttggagcagacatagcatct
ggtcctgtgtggatggagtacatagcctttctaaaatcattgccggctataaatggtcaa
gaagagtcacacaggatgactaatgtgaggaaagtctatcagaaggctattgttactcca
acccatcacattgaacaactttggaaggattatgaaaactttgaaaattctgttagtcgt
cagttggctaaaggactaatatctgaatatcaacccaaatataatagtgctagggcagtt
taccgggagaggaagaagtatgttgatgaaattgattggaatatgcttgctgtaccacca
agtggatcctacaaggaagaaatgcagtggattgcatggaagaggcttttatcttttgaa
aaaggaaatccacagagaatagatactgcctcctccaacaaacgaattatatttacttat
gagcagtgtttgatgtatatgtaccattatcctgatatatggtatgactatgctacatgg
catgcaaaaggtggttccatagatgctgcaatcaaagtatttcaaagggctctaaaggct
ctccctgattcagaaatgctgcgatatgcttgtgcagagcttgaggagtctcgtggagca
attcaggctgcaaagaaaatatatgaaagccttttgggagatggtgtcaatgcaacctca
ctttctcatattcaattcatgcgatttctgagaaggactgaaggtgttgaagctgctagg
aagtactttctggatgcacgaaaatccccaagctgtacttatcatgtttatgttgcttat
gctacaatggcattttgtcttgataaggatccaaagatggctcataatgtttttgaagct
ggactaaaacgctttatgcatgaacctgtttatattctggaatatgctgatttcttgata
cgaatgaatgatgaccaaaatatacgagctttatttgagagggcgttaagttcacttcca
ccagaagagtcagttgaggtctggaaaaagttcactcagtttgagcaaacatatggggat
cttgcaagcatgctgaaggttgagcaaagaaggaaagaagcactttctggagctgaagat
ggaacagcattagagagttctctacaagacattgtatcacggtacagtttcatggatttg
tggccgtgctcttctaatgatcttgatcatttagctcggcaagagtggcttaccaaaaat
atcaataagaaagtagagaagtgtattttggctaatggaacgattcttatagataagaca
tctatgacaaacatttcaactacatcaccgaagatcgtttatcccgatacttcaaagatg
gtgatctatgatccgaagcatacacctggtgcaggtgcaggaactaatgcatttgatgaa
attctgaaagctacaccacctgccttggtagcatttttggcaaatctaccagccgttgaa
ggcccaacaccaaatgtggatattgtgctatcaatttgcttgcaaagtgatctaccaaca
ggacaaagtgcaaaaacagggatttcaacacaagtgcaaactgggaaagtggggattcca
tcacagttgccaggaggttatgctcctgctaccagtgaactttctggttcaagcaagtct
caccctgttccaagtggtgtgtctttgaaaccgggaagtaatagacaatatgggaaaagg
aaggagtcagacaagcaagaggatgatgataccactactgtccaaagtcaaccccttcct
cgagatgctttcaggatacgacagtatcagaaagctcgagccagcagtgcttctcaaacg
ggatcagtttcatatggaagtgcattttctggcgatttatctggcagcactggttga
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