Vigna radiata (mung bean): 106771016
Help
Entry
106771016 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106771016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106771016
03012 Translation factors [BR:
vra03012
]
106771016
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106771016
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106771016
Translation factors [BR:
vra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106771016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
T2SSE
AAA_16
AAA_19
ATPase
PhoH
ABC_tran
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
106771016
NCBI-ProteinID:
XP_014512384
UniProt:
A0A1S3V2K8
LinkDB
All DBs
Position
1:4539058..4550680
Genome browser
AA seq
1183 aa
AA seq
DB search
MPMAYSGIFQGFIRFKTMSRLRCTPLTPYFSSISTTPLRRTAIRLRSSSTELKVVNVTRP
RTVARQGTVTLPFWHQRSSSYGRFAYQDMSSDDSDVEFASHPSHSKQVGDSTLENIDEWR
WKLTMLMRSKDEQEVVSREKKDRRDFEQLSTLATRMGLYSRQYARVVVFSKVPLPNYRPD
LDDKRPQREVVLPFDVHKEVDARLHAHLSQKATASKWSYLNDSLHKSSDSINIPANEGMH
EQPEPLTHNSVVKEKILQRRSLQLRHRQQDWQESPEGQKMLKFRRSLPAFKEKDAFLRLI
SENQVVVVSGETGCGKTTQLPQYILESETEAARGAVCNIICTQPRRISAMSVSERVAAER
GEKLGESVGYKVRLEGLKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNE
DFLLIVLKEILPHRPDLRLVLMSATLNAELFSSYFNGAPTMHIPGFTFPVRAHFLEDILE
RTRHRLTPYNQIDDYGQEKTWKMQKQAQAFRKRKSQIASAVEDALEVADFKGYSLRTQDS
LSCWCPDSIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLQAHPLLGDQSRVL
LLACHGSMASSEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDSGKAKETSYDAL
NNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLC
LQIKTLQLGSISEFLSKALQPPEPLSVENAVEYLKVIGALDGNENLTVLGHKLAMLPVEP
KLGKMLILGTIFKCLDPIMTVVAGLSVRDPFVTPSDKKDLAESAKAQFAAREYSDHLALV
RAYEGWKDAETQQAGYEYCWRNFLSSQTLKAIESLRKQFFYLLKDIGLVNDKPETYNAWS
HEVHLIRAVICAGLFPGISSVMNKDKSITLKTMEDGQVLLYSSSVNGCVPRIPYPWLVFN
EKVKVNSVFLRDSTGISDSVLLLFGGNVSRGGLDGHLKMLGGYLEFFMKPELAKTYLSLK
MELEELIQKKLQDPTQETQSHSQLLSAVRFLVSEDHCDGRFVFGRQVVSQVKKETNSKSG
VEAENFKNQLQSFLNRAGHDSPTYKTKQLKNSQFRSTVIFNGLNFVGQLCSSKKLAEKSA
AAEALLWLKGDSHSSDGIDHASVLLKKSNNKSRKKSFSGAKWS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcccatggcatattccggcatatttcagggcttcatcagattcaaaaccatgtcgcgg
cttcgctgcactcctctcacaccttatttttcatccatttccaccactcctcttcgccgc
accgccattcgcctccgctcctcctccaccgagcttaaagttgtcaacgtcacgcgcccg
aggaccgtcgcgcgccaggggaccgttacgttgccgttttggcaccagcgcagctccagc
tatggtcgttttgcgtaccaggacatgtccagtgacgactccgatgtcgaatttgcttct
catccctctcatagcaaacaagtgggtgattcaacgctcgagaacattgacgagtggaga
tggaagctgaccatgcttatgcgctccaaagacgaacaggaagtggtgtccagagagaag
aaggaccgtcgcgacttcgagcagctttccactttggctaccaggatgggtttgtatagc
cggcaatatgcaagagttgtcgtgtttagcaaggtgcctttgccaaattaccgccctgat
ttggatgataaacgcccacagagagaggtagtcttaccatttgacgttcataaagaagta
gatgcccgtctccatgcccatctttcacaaaaggctactgcaagcaagtggagttatttg
aatgattcattgcataaatcaagtgatagtataaacattccagccaatgaaggaatgcac
gaacagccagaacccttgactcataatagtgttgtcaaggagaaaatcctgcaacgaaga
agtttgcaactgcgtcatcggcaacaagattggcaggaatctcctgaagggcaaaagatg
ctcaaatttcgtagaagtcttcctgctttcaaagagaaggatgcatttttgagacttatt
tcagagaatcaggtcgttgttgtctctggtgaaactggttgtggtaagaccacacaactt
cctcaatacatattagaatctgagaccgaagctgcacgcggggctgtatgtaacataatt
tgtactcagcccagaagaatatctgctatgtctgtttctgaaagagttgcagcagaacgt
ggggagaagttaggagaatctgttggatacaaagttcgcttggagggtttgaaagggaga
gatacccgtcttcttttttgcaccaccggtgtattactgcggagactgcttgtggatagg
aatttaaaaggtgtaactcatgtcattgtcgatgaaattcatgaacgtggaatgaatgaa
gattttcttctcattgtcctgaaggaaattcttcctcatcgacctgatttgagattggtt
ttgatgagtgcaaccttaaatgctgagcttttttcttcatactttaatggtgctccaact
atgcatattcctggttttacatttccagttcgagcacattttcttgaggatattctggaa
agaactagacatcggttgacaccttataatcaaattgatgactatggtcaagaaaaaaca
tggaaaatgcagaaacaagcgcaagctttcagaaaaagaaagagccaaattgcttctgct
gttgaggatgctttagaagttgcggattttaaaggatatagcctacgcacccaagattca
ttgtcctgttggtgccctgactcaattggttttaaccttattgaacatgtgctttgtcac
attgttaagaatgaaaggccaggagctgttttggtttttatgactggctgggatgatata
aactctttgaaggatcaacttcaagctcatcctttgttgggtgatcagagccgagtattg
cttcttgcatgccatggctccatggccagctctgagcagaggttgatatttgaaaatcct
gaaggaggggtgaggaaaattgttctggcaactaacatggctgagactagtattaccatt
aatgatgttgtctttgtggttgactctggaaaagcaaaagaaacatcatatgacgcatta
aataatactccttgtttgcttccatcttggatctcaaaagctgcagcccggcagaggaga
ggaagggccggtcgtgttcagcctggcgaatgctaccatctttaccccagatgtgtttat
gatgcttttgctgattatcaattgccagagcttttgagaacacctttgcagtccttgtgt
cttcaaatcaaaactctacaacttggaagcatctctgagtttttatctaaagctctacaa
ccaccagagcctctatcggttgaaaatgctgttgaatatttgaaggttatcggggcctta
gacgggaatgaaaatttaacagttttagggcacaaattggcaatgcttcctgtagaaccc
aaacttggcaagatgctcattttaggaaccatcttcaagtgtttggatcctataatgact
gttgttgctggtctaagtgtaagagatccatttgtgacgccatctgacaagaaggatctt
gcagagtctgccaaagcccaatttgctgctcgtgaatatagtgatcatcttgcccttgtc
cgggcttatgagggttggaaagatgctgagacacagcaggctggttatgagtactgttgg
cgaaattttctttcttctcaaacacttaaggccattgagtctcttcgaaagcaattcttt
tacttgctcaaagatatcggtctggtcaatgacaagcctgaaacctacaatgcatggagt
catgaagtgcatctcatccgagcagtcatctgtgctggtttgtttcccggaatatcttct
gttatgaacaaagataagtcaataacactgaagacaatggaggatggtcaggttcttttg
tattctagctctgtaaatggctgtgtaccccgaattccatacccatggttagtgtttaat
gaaaaggtgaaagtgaattcagtattcctcagagattcaactggtatatctgattcggtg
cttctcttatttggtgggaatgtatccagaggtggactagatggtcacctgaaaatgttg
ggaggctatttggagtttttcatgaaaccagaattagccaagacttacttaagcttaaag
atggaactggaagaattgatacagaaaaagcttcaggatcccacgcaggaaacacaatcg
catagtcagctcctttcagctgtaagatttttggtttcagaagaccattgtgatggtagg
tttgtctttggtcgccaagtcgtatcacaggtaaagaaggaaacaaactccaaaagtgga
gtggaggctgaaaattttaaaaatcaacttcagtcatttcttaacagagctggacatgat
tcaccaacttacaaaacaaagcagctgaaaaacagccaattccgttctactgtcatattt
aacgggttgaattttgttggtcagctttgcagcagcaaaaaattagcagaaaaatctgct
gctgctgaggctcttctatggttgaaaggggatagccattcatctgatggtattgaccat
gcatcagttcttttgaagaagagcaacaataaaagtaggaagaaatcatttagtggcgct
aagtggagttga
DBGET
integrated database retrieval system
