Vigna radiata (mung bean): 106771889
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Entry
106771889 CDS
T04126
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03420
Nucleotide excision repair
vra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106771889
09124 Replication and repair
03420 Nucleotide excision repair
106771889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vra03051
]
106771889
03400 DNA repair and recombination proteins [BR:
vra03400
]
106771889
Proteasome [BR:
vra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106771889
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106771889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
Ubiquitin_2
Ubiquitin_4
TECR_N
Permuted_GreAB-C
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
106771889
NCBI-ProteinID:
XP_014513401
UniProt:
A0A1S3V4Y0
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Position
8:43643431..43647147
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AA seq
396 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVQPQDTVSEVKKSIETVQGADVYPAAQQMLIHQGKVLKDATTLE
ENNVAENSFIVIMLSKSKSPSGEGSTTSTAPSTKTPQTSAPPTSTAPVSTVPQAPATAEA
PPATVTAPVSSAPAPASISSGTPVEGFDIYGQAASNLVAGSNLEGTIQQIIDMGGGSWDR
DTVVRALRAAYNNPERAVEYLYSGIPEQAEAPLVARAPAGAQPANPTAAAAPQTAQPAPI
TSTGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQEL
GKQNPHLMRLIRDHQADFLRLINEPVEGGEGNILGQLAGGMPQAVTVTPEERQAIERLEA
MGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagactctcaaaggcactcacttcgaaatcgaagtgcagccgcag
gacacggtttctgaagtgaagaaaagtattgaaactgttcagggtgcagatgtgtatcct
gctgcacagcaaatgctaattcaccaagggaaagttctgaaggatgctactaccttagag
gagaataacgtagctgaaaatagtttcattgtaattatgctatcaaagagtaagagccca
tctggtgaaggttctactacttcaactgcaccatcgaccaagacaccacagactagtgca
cctcctacttcaacagcgccagtgtcaacagttccccaagctccagctacagctgaggca
ccgccagcaactgttactgcacctgtatcttcagcgcctgctcctgcatctatttcttca
ggaactcctgtggaggggtttgatatctatgggcaggcggcatccaatcttgttgctgga
agcaatttggaggggacaattcagcaaattattgacatgggtggagggagctgggatagg
gatactgttgtccgtgctcttcgagctgcctataacaaccctgagagagctgttgaatat
ttgtattcaggtatccctgagcaagctgaagctcctcttgtagccagagcgcctgcaggt
gctcaacctgcaaatcctactgccgctgctgctccacaaacagcacaacctgctcctatt
acctcaactggacctaatgctaatcccttagacctttttccgcagggccttcccaatgtg
ggttctggtgctgctggtgctggctcattggatttcctacgcaacagtcaacaattccaa
gccttgcgggctatggtgcaggctaatccacaaatattgcagcctatgctacaggaactc
ggcaaacaaaatcctcatcttatgaggttgattcgagatcatcaagctgatttccttcgc
ctgataaatgaacctgtggaaggtggcgaagggaatatattggggcagctggccggtggc
atgcctcaagcagtgactgtcactcctgaggagcgccaagctattgaacgtcttgaagca
atgggttttgatcgtgcgatcgtattggaggtgtacttcgcgtgtaacaaaaatgaggaa
ttggctgccaactaccttttagatcacatgcacgagttcgatgaacaatag
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