Vigna radiata (mung bean): 106772043
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Entry
106772043 CDS
T04126
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106772043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106772043
03041 Spliceosome [BR:
vra03041
]
106772043
03036 Chromosome and associated proteins [BR:
vra03036
]
106772043
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106772043
Spliceosome [BR:
vra03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106772043
Complex B
106772043
Complex C
U2 SnRNP specific factors
106772043
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106772043
TFTC complex
106772043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
106772043
NCBI-ProteinID:
XP_014513669
UniProt:
A0A1S3V697
LinkDB
All DBs
Position
8:44957401..44962920
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA
IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGHAARDAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRREDLPAERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDEDDVEASSATLMETEEGFPPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFLIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGPGNADQMENGGDDEDK
DDPLSDEHYGYPKAESEKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQAYRDRIYVGDVQESFHYCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS
HLEMHMRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtctcactctccagcgtcccaccggcatcatctgtgccatcaacggc
aacttctccggcggcaagagccaggaaatcgtcgtcgcccgaggcaaggtccttgatctc
ctccgtcccgacgacaatggccggatccaaaccatcctctccgtcgaaatcttcggcgcc
attcgctctctcgctcagttccgcctcatgggcgctcagaaggactacatcgtcgttggc
tccgactccggccgcatcgtaatcctcgaatataacaaagagaaaaacgtattcgacaaa
gttcaccaagaaacctttggaaaatctggttgccgccgaattgtcccaggtcagtacctc
gccatcgatccaaagggtagggccgttatgattggcgcctgcgagaagcagaaacttgtt
tatgttttgaatagggacactgctgctaggttaaccatttcttcccctttagaagctcat
aaatcgcacactttagtttattcaatttgcggtgttgactgtggctttgagaaccctatt
tttgctgctattgaattggactactctgaggccgaccaggattccactggtcatgctgct
cgtgatgctcagaagcatttgaccttttatgagcttgatcttgggctcaaccatgtttcg
cggaagtggtccgagcaggttgataatggggccaatttgcttgttactgttcctgggggt
ggtgatggccctagcggggtgcttgtttgtgctgaaaattttgttatttataagaatcag
ggtcatcctgatgttagggctgtgattccacggcgagaggacttgccggctgagcgtggc
gtgcttattgtctctgctgccatgcataaactgaagagcatgttcttcttcctcctgcag
acggagtatggggatatttttaaggtcacattggaacacaacaatgaccgtgtatctgaa
ttgaagattaaatattttgatactattcctgttactgcttcgatgtgtgtgctgaagtca
gggttcttatttgctgcctcagagtttgggaaccatgctttgtatcaatttaagtctata
ggtgatgaggatgatgtggaggcatcatctgccactttaatggaaaccgaggaaggtttt
ccgcctgtgtttttccagcccaggaggctgaaaaaccttgtcaggattgaccaggttgag
agtttaatgccaataatggatatgaaggtcagtaatctctttgaagaggaaactcctcag
atttttactctctgtggacgtggtcctaggtcgtctttgaggattttaagaactggttta
gcagttagtgagatggctgtgtctaagcttcctggtataccaagtgctgtttggactgtg
aagaagaatgttattgacgagtttgatgcttacattgttgtgtcattcacaaacgcaact
cttgtgctttccattggtgagactgttgaagaagttagtgacagtgggtttcttgacacg
actccctcccttgctgtttctttgataggagatgattctctcatgcaggttcacccaaat
ggtattaggcatatcagggaggatggccgtattaatgaatggagaacacctggaaagaga
acaatttcaaaagttggatcaaataggcttcaggttgttattgcactcagtggaggggag
cttatatattttgaagttgatgttactggtcagttgatggaggtggagaagcatgaaatg
tctggagatgttgcttgtttagacattgctccagtgcccgaaggcagacaaagatctcga
tttcttgcagttggctcatatgacaagaccatccgcatcttatcactggatcctgatgat
tgtatgcaggcactaagcgttcagagtgtttcttcagctccagaatctctactttttctt
gaagttcaagcttctgttggtggtgaggatggtgcagatcatcctgctagcctattcttg
aatgctgggttacagaatggtgtgttgtttagaactgtggtggacatggttacaggtcag
ctttctgattcgcgttccaggttcttaggattgagagccccaaagctgtttctcatcatt
gtgagaggcaagcgggctatgctttgtttgtctagtcgaccctggcttggttatattcac
caaggacattttcttttaacacccctttcatatgaaacccttgaatatgctgcttcattt
tcatctgaccagtgtgtagaaggtgtagttgctgttgctggcgaggccttgagaattttt
accatagaaaggttaggagaaacattcaatgaaactgtaattccattaaggtacacacca
aggaaatttgtgctgcaacccaaacgaaaactccttgtgatgattgagagtgatcaggga
gcattaactgcagaagagcgtgaagctgctaggaaagagtgttttgaggctgctcaagcc
ggggagaatggtcctggaaatgcggaccaaatggagaatggtggtgatgatgaagataaa
gatgatcccctctctgatgaacactatggctatccaaaagctgaatcagagaaatgggtt
tcatgcatcagagttcttgatcccaggacaggaaatacaacttgtcttttggagcttcag
gagaatgaggctgctttcagcatatgcacagtaaatttccatgataaggaatatggaacc
cttttagctgttgggacggcaaagggactgcaatttttgcccaaaaggactgtaactgca
ggatttattcatatttataggtttgtagaggatggaagatctcttgaacttcttcacaaa
acacaggtagaaggtgttcctcttgctctatgtcagtttcaaggaagattacttgcaggg
ataggacctgtgctcaggttatatgatttgggaaaaagacgtctgttaagaaaatgtgag
aataagctattccccaacacaattgtctctattcaggcatatcgtgatcgaatttatgtt
ggtgatgttcaagagtctttccattactgcaagtataggcgggacgaaaaccaactgtat
atatttgccgatgattgcgttccaaggtggcttactgcatcgtaccacatagattttgac
accatggcaggcgcagacaagtttggaaatatctattttgtgcggctgccacaagatgtt
tcagatgagatagaagaagatcctactggtggtaggatcaagtgggagcaaggaaagctg
aatggagctcccaataaggtggaagaaattgtacagtttcatgttggtgatgtggtcaca
tgcttgcaaaaggcttctctcataccaggtggtggagagtgcattgtatttggaacagtt
atgggaagtgtgggtgctctacatgcctttacttcacgagatgatgttgacttcttttct
catttggagatgcatatgagacaggatcacccacctttgtgcggaagagaccacatggca
tataggtctgcatattttcccgttaaggatgttattgatggggatctatgcgagcaattc
ccaacattgccaatggatttgcagagaaaaatcgctgatgaattggacagaacccctgga
gagatactgaagaaactcgaggaagtgagaaataagattatttaa
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