Vigna radiata (mung bean): 106772202
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Entry
106772202 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106772202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106772202
03012 Translation factors [BR:
vra03012
]
106772202
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106772202
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106772202
Translation factors [BR:
vra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106772202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
NPHP3_N
Dicer_dimer
T2SSE
PhoH
Motif
Other DBs
NCBI-GeneID:
106772202
NCBI-ProteinID:
XP_014513924
UniProt:
A0A1S3V713
LinkDB
All DBs
Position
8:42958012..42970722
Genome browser
AA seq
1193 aa
AA seq
DB search
MLSVTQPSCIPKTLKPFIPLPSPAMKDRRTLSSYGSLYIPPHLRLRSVANFNNSPSPLRA
KPHENPTHTISTLQPPFTERVTDKARSLFVSAYDDTVSEEGSDREFELPSLVPASKFACL
PNASLDDNTDEWKRKFTMLLNDKSKHELISREKRDRRDFERIAVIASGMGLYSHMYAKVV
VFSKVPLPNYRYDLDDRKPQREVSLSFTTFTRVKAHFEEYLSQKSRMNKSCLDLSSGRSN
SNCSIGMDEGLFEQPEPLASSKAVMEKIVWQRSLQMRSQQQAWQESAEGSRMLEFRRSLP
AYKKKEEILSVISRNQVVIISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRIS
AMSVSERVAFERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHV
IVDEIHERGMNEDFLLIILKELLLHRPELKLILMSATLDAELFSSYFNGAPTMFIPGFTY
HVRTHFLENILEMTGYRLTPYNQIDDYGQEKMWKMNRQVPRKRKSQIASVVEDAIRAADF
KDYSPHTQESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISCLKEKLLTH
TVLGDPNRVLLLTCHGSMASSEQRLIFEEPEAGVRKIVLTTNIAETSITINDVVFVLDCG
KAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFSEYQLPE
ILRTPLQSLCLQIKSLRLESISEFLSRALQSPEILAVQNAIEYLKIIGALDEKENLTILG
RYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCG
EYSDHLALVRAYDGWKDAEMDMGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDS
NAASCNAWSSDLNLIRAVIFYGLYPGIGSVVNNEKSFSLKTMEDGQVLLYSNSVNTRETK
IPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLLKGDADNHLKMLGGYLEFFMDPS
VVEMYQSIRRELDAFIQGKLLFPRMGIQWYQDLLSAVRLLISNDQCEGRFVFGRQVHKPS
KKSIMLASHPTLVSRTESGPGGDNSKSQLQTLLTRAGCAAPVYKTKQLKNNQFQAAVEFN
GMQIMGQPCNNKKSAEKDAAAEALQWLMGGKQAGREYINHLSMLLKKSKKDHN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggtcacgcaaccttcgtgcattcccaaaaccctaaaacccttcattcccctt
ccgtctccggccatgaaggaccgccgcacgctgtcctcctatggctctctttacattccg
ccgcacctccgtttgcgctccgtcgccaatttcaacaactcaccctctccgcttcgcgcc
aaaccccacgaaaaccctacacacaccatttctactctgcaaccgccgttcacggaacga
gttaccgataaggcacgctcgctcttcgtttctgcttatgacgatactgtttccgaggaa
ggctccgatcgtgaattcgaacttccctcactagtgcctgcttccaaatttgcttgtttg
ccgaatgcttcgcttgatgataacactgacgaatggaagcgaaaatttaccatgctctta
aatgacaagagtaagcacgaattaatctcgagggagaaaagggataggcgtgattttgag
cgaatagcagttattgcaagcggaatggggctgtatagccatatgtatgctaaggttgtt
gtcttcagtaaggtcccacttccaaattacagatatgatttggacgatcggaagcctcag
agggaggtgagcttgtctttcaccacatttacccgtgttaaggcgcattttgaggaatat
cttagccaaaaatccaggatgaacaaaagctgtttggatttgtcatctggaagatctaac
agtaattgcagtattggtatggatgaggggctttttgagcaacctgagccactagcttca
agtaaggctgttatggagaaaattgtttggcagaggagcttacaaatgcgttctcagcag
caagcttggcaggaatctgctgaaggaagtagaatgctagaatttcgcagaagtctccca
gcttataaaaagaaagaagaaatattatcagtcatatcaaggaatcaggtagttatcatt
tcaggcgaaacaggttgtggcaagacaacacaaattccacaattcattttagaatctgag
atagaatcagttcgaggagctgcttgtaatatcatatgcacacagccaagacgcatttca
gccatgtcagtttctgaacgagtggcctttgagaggggagagaaattgggcgaatctgtt
ggatataaagttcgacttgagggtatgaaagggagagatacccatcttctcttttgcacc
acaggcattttattaagaagattactggctgatagaaagttgaaaggcgtaactcacgtt
attgtggatgaaattcatgagcgagggatgaatgaagattttctgcttattatccttaaa
gaactccttctccatcggccagaactgaaactgattttgatgagtgctaccctagatgca
gagctcttttcttcgtactttaacggggctccgactatgtttattcctggcttcacatac
cacgtcagaacccattttttggagaacattcttgaaatgacgggctacagattaactcct
tataatcaaattgatgattatggtcaagaaaagatgtggaaaatgaacagacaggtccca
agaaagaggaaaagtcaaattgcttctgtcgtagaggatgcaattagagctgctgatttc
aaagattacagcccacatacacaggagtctttgtcatgttggaatcctgactgcattggt
tttaatctcatagaatatattttgtgcaatatatgtgagaatgaaagacctggtgctgtt
ttggttttcatgactggatgggatgatataagctgtctgaaagagaaactcctgactcac
actgtcttgggagatccaaaccgtgttctgttgcttacatgtcatggctcaatggctagc
tcagagcagagattaatatttgaagagcctgaagctggagtaagaaaaatagtgctaaca
acaaatattgctgaaaccagtatcacgataaatgatgttgtttttgttcttgactgtgga
aaagcgaaagaaacatcatatgatgctctgaacaacacaccttgtctgcttcctacatgg
atttctaaggtttcttctcaacaaagaagaggaagagctggtcgggtacaaccaggagag
tgttaccatctctatcctagatgtgtgtatgatgcattttcggagtatcagttgccagaa
attttgagaacacctctgcagtccctctgtttacaaattaaaagtttgagacttgaaagc
atatctgagttcttgtccagggctttgcagtctcctgagatacttgcggtgcaaaatgca
attgaatatttaaaaataattggagctttggatgagaaagagaatctcactattctaggg
cgctacttgacaatgcttcctatggaacccaaacttggcaagatgctaatattaggtgct
attttcaattgcctggatcccatattaactgtggttgctggtctcagtgtgagagatcct
tttctaacaccgttggataaaaaagatcttgcagaggctgcaaaatctcaattctgtggt
gaatatagtgaccaccttgcacttgtaagggcatatgacggttggaaagatgctgaaatg
gacatgggtggatatgaatactgttggaaaaatttcctttccttacaatccatgaaagct
attgatgctcttcggagagagttcatatgcctgctcaaggataccggattagttgatagc
aacgcagccagctgcaatgcatggagctctgatctaaatcttatccgagcagttattttc
tatggcctatatcctggaattggttctgttgtgaataatgagaaatcattctctttgaaa
acaatggaggatgggcaagtgctcctatattcgaactcagtgaatactcgggaaactaaa
attccatatccatggcttgtttttaacgagaagataaaagtgaactcggtttttctccgc
gactcaacagccgtgtctgattcagtggtgcttctgtttggaggaagcttattgaaagga
gatgctgataaccatttaaagatgttgggaggatatcttgagttttttatggatccgagt
gttgttgaaatgtaccagagtataaggagagaacttgatgccttcattcagggcaaacta
ctttttccaagaatgggcatacagtggtatcaagatctcctatctgcagtacggctgctg
atttccaatgaccaatgtgaaggtagatttgtatttggtcgccaggtccataaaccatct
aaaaaatctattatgttggcctcacacccaaccttggtttcaaggactgagagtggacct
gggggagataattctaaaagtcagctccaaacattgcttacgagagcaggatgtgcagca
cccgtctacaagactaaacaattgaagaacaatcagtttcaggctgcagttgaattcaat
ggaatgcagataatgggtcaaccttgtaacaataaaaagagtgcagaaaaagatgctgca
gctgaggcattgcagtggctgatgggtggaaagcaagcaggcagggagtatatcaatcac
ttgtcaatgttacttaagaaaagtaagaaggatcacaattaa
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