Vigna radiata (mung bean): 106772265
Help
Entry
106772265 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106772265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106772265
03012 Translation factors [BR:
vra03012
]
106772265
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106772265
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106772265
Translation factors [BR:
vra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106772265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
Rad17
AAA_19
BEX
NACHT
DUF4254
ATPase
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
106772265
NCBI-ProteinID:
XP_014514035
UniProt:
A0A1S3V6W7
LinkDB
All DBs
Position
8:complement(1634532..1644503)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRSNLLRPTLNISHRSLAFLHLPSPKSFPANLPISSSVMAYRPNYQGGGRRGGSSAGGRG
GGRRGGGGGRGGRGEQRWWDPVWRAERLRQQQAEKEVLDENEWLDKIEKMKGGGEQEMVI
KRNFSIADQKTLADIAYQHELYFHAYSKGKILVVSKVPLPDYRADLDDRHGSTQKEIRMS
TDIERKVGNLLNSSHSMGAAPSSLHSVSADLGHKQSAITIKTVSSQHTDSFKEKLSVALK
EKQELSQASNSLKEMKSFREMLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQLPQFIL
EEEISCLRGADCNIICTQPRRVSAISVATRISSERGESIGETIGYQIRLESKRSADTRLL
FCTTGVLLRQLVQDPDLKGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSAT
INADLFSKYFANAPTIHIPGFTYPVAEYFLEDVLEKTRYSIKSDFDNYEGNSRRRSKQQD
SKKDPLTEMFEDIDVDINYKNYSLGVRKSLEAWSGVQIDLGLVEATIEYICRNEGSGAIL
VFLTGWDEISKLLDKLKGNNLLGDPHKFLILPLHGSMPTANQCEIFDRPPPNKRKIVLAT
NIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVC
YRLYPKLIHEAMPPYQLAEILRTPLQELCLHIKSLRLGTVASFLEKALQPPDPLAVKNAI
ELLKTVGALDEHEELTPLGRHLCNIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPF
VLPINRKEEADAAKQSFAGDSCSDHIALLKAFEGWKDAKRSGNEKQFCWDNFLSPVTLRL
IDDMRMQFLNLLSDIGFVDKSRGPNAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTA
FYTKEVGKVDIHPASVNAGVHLFPLPYIVYSEKVKTTSIYIRDSTNISDYALLLFGGNLV
PSKSGEGIDMLGGYLHFSASKSVIELIRKLRRELDKLLNRKIEEPGFDVSSEGRGVVAAA
VELLHSQVIR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcaaccttttgcgccctactttaaacatatcccatcgtagcctcgcttttctg
cacctgccctcacccaaatctttccccgcgaaccttcccatttcctcttccgtcatggcc
taccgccccaactaccaaggcggcggccgcaggggaggatcctccgccggcggtcgagga
ggtggccgccgtggaggtggcggaggacgcggcggacgcggcgagcaaaggtggtgggac
cctgtttggcgcgccgagcgccttagacaacaacaagccgagaaggaggtgctagatgag
aatgagtggttggataaaatagaaaagatgaagggaggaggggagcaggagatggtgatt
aagcgtaactttagtattgcagatcagaaaaccctagctgatatagcctatcagcatgaa
ctctacttccatgcttacagtaaagggaagattctcgttgttagcaaagttccactgcct
gattatcgtgcagatcttgatgatcgtcatggatcaacacagaaggagattagaatgtcc
actgacattgagaggaaagtaggaaaccttttgaatagttcacattcaatgggggcagcg
ccatctagtctgcattctgtgtcagctgaccttggacataaacaatctgcaatcactata
aaaactgtttcttcacaacatactgattcttttaaggagaaacttagtgttgcgctcaaa
gaaaagcaagaactttcacaggcaagtaatagcttgaaggaaatgaaatcatttagggag
atgcttcctgcatttaaaatgaagtctgagtttctaaaagccgttcaagaaaatcaggta
ttagtagtttcaggagagacgggttgtggtaaaacaacacagttgccacaattcattctg
gaagaagaaatatcgtgtttgcgtggagctgattgcaacataatttgcactcagcctcgt
cgggtatctgctatttctgttgcaactcgaatatcttcagagagaggtgagagtattggg
gaaacaattggatatcaaatccgtcttgaatcaaaacgttctgcagatacacgcctgctt
ttctgcaccactggtgttttacttaggcagttggtacaagacccagacttgaaaggtgtt
agtcatttgctggtggatgaaattcacgaaagaggcatgaatgaagactttttaattata
attttacgtgaccttcttccacgacgtccagatctgcgtctcattttgatgagtgccact
attaatgctgatttgttctctaaatactttgcaaatgccccaacaatacacataccggga
tttacttatcctgtggcagagtacttcttagaagatgtgttggagaaaactcgatacagc
atcaagtcagattttgacaattatgaggggaattcaaggaggagaagcaaacaacaggat
tcaaagaaggaccccttgactgaaatgtttgaggatatagatgttgatattaattacaaa
aattacagcttgggtgtaagaaaatctcttgaagcttggtcgggtgtgcagattgatttg
ggattggtagaggctacaattgaatatatatgtcggaatgaaggtagtggagcaattctt
gtatttctcactggctgggatgaaatctctaaattacttgacaaacttaaaggaaataac
ttactcggagaccctcacaagtttttgatccttcctttacatggttcaatgccaactgcc
aaccaatgcgagatatttgatcgtcctcctccaaacaagaggaaaattgttctggcaaca
aatattgctgagagtagcatcaccatagatgacgttgtgtatgtcatagactgtggcaaa
gcaaaggagaccagctatgatgctctaaataagcttgcctgcttgttgccatcatggatt
tcaaaggcttcagctcatcagagacgtggacgtgctggtcgagtgcaacctggagtttgt
tataggttatatccaaaactgatccatgaagcaatgcctccataccagttagctgaaatc
ctccgaacacctttgcaagagttgtgccttcatattaaaagtttgcggcttggaactgtg
gcatcatttttagaaaaggcacttcaaccaccagatcctttggctgttaagaatgctatt
gaacttcttaaaacagttggggcgttagatgaacacgaggagctcactccacttggtcgc
catctttgtaacatacctttggacccaaacataggaaagatgcttctcatgggctctatc
tttcagtgcctcaatcctgccttaactattgctgctgctcttgcttaccgcaacccgttt
gtcttacccataaacagaaaagaggaagctgatgcggcaaaacaatcttttgctggtgat
tcttgcagtgatcacatagcccttctcaaagcttttgaaggatggaaggatgcaaaacga
agtgggaatgagaagcagttttgttgggataattttctgtcccctgtaaccttgcggttg
attgatgatatgaggatgcagtttctcaatttattatctgacattggatttgttgacaag
tccaggggacctaatgcttacaaccagtacagtcacgatttggagatggtttgtgcaatt
ctttgtgccgggctctaccccaatgttgtgcagtgcaaaagaagagggaaaaggacagca
ttctacactaaagaagtagggaaggttgacatccatcctgcttctgttaatgctggggtt
catctctttcctctgccgtacattgtgtatagtgaaaaggtgaaaacaaccagcatctat
attagagactctacgaatatttcagattatgccctacttctatttggtggtaatctagtc
cccagcaaaagtggtgagggcattgacatgcttggaggttaccttcatttctctgcttca
aaaagtgttatcgagttaataaggaaattacgtagggagcttgacaagcttctgaacaga
aaaattgaagaacctggatttgacgtttcttcagaaggaaggggtgtggttgccgctgct
gttgagttactgcatagtcaagtcattagataa
DBGET
integrated database retrieval system
