Vigna radiata (mung bean): 106772285
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Entry
106772285 CDS
T04126
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106772285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106772285
Spliceosome [BR:
vra03041
]
Common components
Common spliceosomal components
SR proteins
106772285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
106772285
NCBI-ProteinID:
XP_014514070
UniProt:
A0A1S3V702
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All DBs
Position
8:complement(41011541..41015434)
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AA seq
367 aa
AA seq
DB search
MKPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALDRIEF
GRRRLRVEWTRHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKI
LSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRD
RQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPA
YGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHGISPSHSPEERGRTSPQNGRGSSH
SPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRS
QSPPADE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctattttctgtggaaactttgaatatgatgcccggcagtcagagttggagcgg
ctttttagacgatatgggaaggttgacagggtggatatgaagtctggatttgcttttatc
tatatggaagatgaaagagatgctgaggccgctattcgtgctcttgatcgaatagaattt
ggtcgccgaagactccgtgttgaatggacaaggcatgaacgtggtgttagaaggccatct
agttcaagaagatcttcagctaatgggaggccatcaaagaccttgtttgtaataaatttt
gatacataccataccagaacaagggacttagagaggcactttgaaccgtatggtaagata
ctcagtgttaggatcagaaggaactttgcttttgttcagtatgaatcggaggatgatgct
agcagagcactggaagctacaaatatgagtaagttactggatcgagttatttcagttgaa
tttgctgtaaaagatgatgatgataggagaaatggatatagccctgagagaggccgtgat
cgtcagcgtgatagaagccgtgatggaagacgatcccttagtccttataggagagaaaga
ggtagtcctgattacggtcgtgggcccagtccgtatcagagagagaggggaagtcctgac
tatggccgagaccgaagccgtagcagaagcccccctagaagggagccagccagccctgca
tatggacgtagaagccccagtccatatagaagagaaagggagggttctgatcctgttagg
gactccagccgcagtccttatcacaaagagcgagggagaactgaccatggcatttctcct
tctcatagtcctgaagaaagagggaggacaagtcctcaaaatggtcgtggttctagccat
agtcctcgtgatactgagaagattagccctgaaaatgggcatggctctggaagtcccgat
gaaaaagggaatgccagcccttacaatggttacggaaggagcccaaataccgtgcctgat
gccagggacagtcctaactacggtggtcctgaaagtcccatgcatgaaagatatcgcagc
cagtctccccctgcggacgaatga
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