Vigna radiata (mung bean): 106772331
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Entry
106772331 CDS
T04126
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106772331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106772331
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106772331
Spliceosome [BR:
vra03041
]
Complex C
Other components
Step II factors
106772331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
AAA_16
TsaE
Sigma54_activ_2
Flavi_DEAD
ABC_tran
PhoH
SLFN-g3_helicase
T2SSE
Motif
Other DBs
NCBI-GeneID:
106772331
NCBI-ProteinID:
XP_014514179
UniProt:
A0A1S3V7R2
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All DBs
Position
8:complement(39702442..39705330)
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AA seq
721 aa
AA seq
DB search
MLDTIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLS
IQEQRQSLPIYKLKKELIQAVXDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ
PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLS
QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPKLRLIVTSATLDAEKFSGYFFNCNIFTI
PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEKIDFACQSLYERM
KGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDP
GFAKQNVYNPKLGLDSLVITPISQASAKQRAGRAGRTRPGKCYRLYTESAYRNEMSPTTI
PEIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLG
RKMAEFPXDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ
PEGDHLTLLAVYEAWKAKNFSGPCCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAG
RNFTKVRKTITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQLDWVIYHELVMT
TKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatacaattccgaaggatctcaatcggccttgggaagaccctatgccagagtca
ggtgaaaggcatcttgcccaggagcttaggggtgttggtttatcagcctatgatatgcca
gaatggaagaaggatgcatatgggaaaacaattacctttgggcaaaggtcgaagctttct
attcaagagcagaggcagagtttgccaatttacaagttaaaaaaagaattgattcaggct
gtgnatgataatcaggtgttggttgttattggagaaactggttcgggtaagactactcag
gtcacacagtatcttgccgaagcaggttataccacaaaaggaaaaattggatgtactcaa
cctcgtagggtggctgcaatgtcagttgcaaagagagtagcagaagagtttggttgtaga
ttgggagaagaagttggttatgccattcggtttgaggattgcactggaccagatactgtt
atcaagtacatgacagatggtatgcttcttagggaaatattggtagatgagaatctgtca
cagtattctgttataatgcttgacgaagcccatgaaagaactattcatactgatgttctt
tttggactgctcaagcagctagtgaagcgaagacccaaattgcgattgattgtcacttct
gctactctggacgccgagaaattttcaggatatttctttaactgtaacatctttacaatt
cctggtagaacttttcctgtagagatactttataccaaacagccggaaagtgattattta
gatgcatctttaataactgtcctacagatacacttgacagagcccgagggagacattctt
ctctttttgactgggcaagagaagattgattttgcttgccaatctctatacgagagaatg
aagggattaggtaagaatgttccagagctgatcattttaccggtttatagtgcccttcct
agtgaaatgcagtctaggatatttgaacctgctcctccagggaaaaggaaagtggtcgtg
gctactaacattgccgaggcttctttgactattgatgggatattttatgtaattgatcct
ggatttgctaagcaaaatgtttataacccaaagctaggtcttgattctttggtaataact
ccaatttcacaagcatcagccaaacaaagagctggacgtgcagggcgtactcgacctggg
aagtgttatcgcctttacactgagagtgcatacaggaatgagatgtctcccactacaatt
cctgagattcaaaggataaatctggggatgactacacttaatatgaaagcaatggggata
aatgatctactgtcctttgattttatggatccaccatcacctcaagcactgatttctgcc
atggagcagctttacagtctaggagcattggatgaagagggccttctgaccaaattgggg
aggaaaatggcagaatttccttnggatccacctttgtccaagatgttgcttgccagcgtc
gaccttggatgcagtgatgagattttaaccataattgccatgatccagactggtaatatt
ttttacaggccaagggaaaagcaagcccaagcagatcagaagagggcaaagtttttccag
ccagagggtgatcatctgacactacttgctgtttatgaggcttggaaagccaagaatttt
tctgggccctgctgttttgagaattttgtgcaatctagatcgttgagaagagcacaggat
gtcaggaaacaacttctcaccattatggataagtacaaattggatgttgtaagtgctgga
agaaacttcaccaaagtaaggaagactatcactgctggtttcttttttcacgctgccaga
aaggatccccaggaaggatacagaactctagttgagaaccaacctgtgtatatccatcca
agttctgctttgttccagaggcagctagactgggtcatatatcatgagcttgtgatgaca
actaaggagtatatgcgtgaggtgactgtcatagaccccaaatggcttgttgaactggct
ccaagatttttcaaagtagcagatcctacaaagatgagcaagcggaagcgtcaagagcga
attgagccactttatgatagataccacgagccaaattcatggcgtttgagtaaacgtcgt
gcatga
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