Vigna radiata (mung bean): 106772566
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Entry
106772566 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106772566
03041 Spliceosome [BR:
vra03041
]
106772566
03036 Chromosome and associated proteins [BR:
vra03036
]
106772566
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106772566
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106772566
mRNA cycle factors
Common to processing body (P body) and stress granule
106772566
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106772566
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106772566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106772566
NCBI-ProteinID:
XP_014514541
UniProt:
A0A1S3V869
LinkDB
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Position
8:2464506..2472295
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AA seq
610 aa
AA seq
DB search
MRTSWADSADNSAIGSGNGNFSAHPPRGAYVPPHLRNRSLSSEVPAVSHSPAPLPANDRG
NPGGAAPHQGGGYFKADQGRQQGYGSGYQTGGGWNGRGAGRDRGRREVNPFENDEADDKS
LEQENSGINFEAYDDIPVETSGDNVPPPVNTFAEIDLGEALNHNIQRCKYVKPTPVQRYA
IPISLSGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTAFPLALILSPTREL
SCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSL
QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLS
NYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENGIYGKQGLTLVFVETKK
GADALEHCLCVNGFPAASIHGDRTQQERELALRSFKTGNTPILVATDVAARGLDIPRVAH
VVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNESNVSLAKPLADLMQEANQEVPAWLT
RYAARAAYSGGNRNRRSGGSRFGGRDFRREGSFNKSTEYYGGGNGGGAAGGYGNYGGGGG
YGQGVTSAWD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcgtgggcagattctgctgacaattcagccattggttctggcaatggcaat
ttctcggctcaccctccccgaggtgcatatgtgcctccgcatcttcgcaacaggtcattg
tcgtcggaggttcctgcagtgtcacactcgccggctcctttaccggcgaatgacagaggg
aatcctggtggtgcagctcctcatcagggaggtggttactttaaagctgatcaagggcgg
caacaaggatatggttctggttatcagactggtggtggctggaatggtagaggggcgggg
agggaccgtgggaggcgtgaggtgaacccttttgagaatgatgaagctgatgataaatct
ctggagcaagagaacagtgggattaacttcgaggcttatgatgatatccctgtggagact
agtggggacaatgtgcccccgcctgtgaatacatttgctgaaatagatttgggcgaggca
ttgaatcataatatacagagatgcaagtatgtgaaaccaaccccggttcagaggtatgcc
attccaatttccctttctgggcgagacttgatggcctgtgctcagaccgggtcaggaaag
acagctgccttttgcttccctattataagtggaataatgagggagcaatatgttcaaagg
ccacgtgtggctagaactgcttttccgctggcacttatcctctcccccacacgggaactt
tcatgtcagatacacgatgaggccaaaaagttttcttaccaaacaggtgtgaaagtggtg
gttgcttatggaggagctccaatcacccaacagttacgggagcttgagagaggagttgat
attctggtggctactccaggaagattggtggatttgctcgagagggctcgggtgtcactg
cagatgataaggtatttggcgcttgatgaggcagatcggatgctggacatgggttttgag
cctcaaataagaaagatagttgaacaaatggacatgcctcctccgggcatgagacagaca
ctgttgtttagtgcaacatttccaaaagagatacagagacttgcatcagattttctttca
aattatgtgtttctggctgttggaagggttggttcaagtactgatctaattgctcaaaga
gtagaatatgttcttgagtcagacaagagaagccatctcatggatcttcttcacgctcag
agggaaaatggaatttacggcaagcaaggtctgacattagtttttgtggaaacgaagaaa
ggagctgatgcattggaacactgcttgtgtgttaatggatttcctgcagctagcattcat
ggtgacagaacacaacaagaaagagaactagcattgaggtcgttcaagactggaaacaca
ccaattctagtggcaacggatgttgcagcacgtggtctggacatccctcgggtagcacat
gtggtaaattttgatcttccgaatgacattgatgattacgtgcaccgaataggaagaacg
gggcgagctggtaaaatgggattagcaacggcctttttcaatgaaagtaacgtatccttg
gccaaaccattggctgatctgatgcaagaggctaatcaagaagttcctgcctggctcacc
cgttatgcggcaagggctgcttacagtggtggtaacagaaacaggaggtcagggggatcc
cgttttggtggtcgtgattttaggagggaaggctcatttaataaatcaacagagtactat
ggcggtggaaacggtggtggagctgctgggggatatggcaattacggtggaggaggaggg
tatggtcaaggtgtgacaagtgcttgggattag
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