Vigna radiata (mung bean): 106772788
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Entry
106772788 CDS
T04126
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03410
Base excision repair
vra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106772788
03450 Non-homologous end-joining
106772788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vra03400
]
106772788
Enzymes [BR:
vra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106772788
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106772788
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106772788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
NTP_transf_2
BRCT_2
HHH_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
106772788
NCBI-ProteinID:
XP_014514862
UniProt:
A0A1S3V9I3
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Position
1:16843806..16874998
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AA seq
548 aa
AA seq
DB search
MQALKHRPLASPWFLVEAINKESKRRKMAPKKKPESDPSGMFSGMVVFLVPKGVQVRRLQ
IWKERLVRMGAVIEERLCKRVTHVFAMNSDTLLQQLDRERLTRFKGRVLIYQWLEDCLKS
GEIVPEDMYVLNLNSQGKPEKSWDPQPCQSDPQQLHNNKKTKYTEIINNESNDQGGKNVS
LLSTSSHEEGDSLSYGNIRPQHLDSESDDSSSSYCPPDQNKNITEIFGKLVTIYRALGDD
RRSFSYYKAIAVIEKLPYKIESADQINNLPSIGKSLKDHIQEIITSGKLSKLEHFEADEK
VRTISLFGEVWGIGPSTALKLYEKGHRSLDDLRNDGSLTNAQKLGLKYFDDIRERIPRHE
VQDMEHILQKAGEEVLPGVVIICGGSYRRGKATCGDIDIIITHPDGQSHKGFLPKFVKHL
KHMNFLREDLIFSTHSEEGSDSGVDTYFGFCTYPGQELRRRIDLKVYPRQIYAFGLIAWT
GNDVLNRRLRLLAESKGFRLDDTGLFPATHGSGSKRGAKGSASLKFNTEKEVFHFLDFPW
LEPHERNL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcactgaagcataggccactcgcatcaccgtggtttctcgtagaagccatcaac
aaggaaagtaaacgtcgcaaaatggcgccaaagaagaagccagagtccgatcctagtgga
atgttctcaggcatggtggtgtttttggttcccaaaggagtccaagtccgtcgactccag
atttggaaggagaggttggtgcgaatgggggctgtgatagaggagcgcctctgcaaacgg
gtcactcatgtttttgctatgaactcagatacgcttcttcaacaactggatagggaacgt
ttgacacgttttaaagggagagttctcatttatcaatggctggaggactgcttgaaatca
ggggagatagtacctgaagatatgtatgtgctgaacttgaattctcaaggcaaacctgaa
aagtcttgggaccctcaaccatgtcagagcgatcctcagcaattgcataataataaaaag
accaaatacacggaaattataaataatgaaagtaacgatcagggagggaaaaatgtttca
cttttatcaacaagcagccatgaggaaggtgatagtttaagttatggaaatataagacct
caacaccttgattctgaaagtgacgattcatcttcatcatactgtccacctgatcaaaac
aaaaacataacagaaatatttgggaaacttgtaaccatatatagagcattgggagatgat
cgaaggtcctttagctattacaaggctattgctgttattgagaagttgccatataaaatt
gaaagtgctgaccagataaacaacctgccatctattggaaaatcattgaaagatcatatt
caagagatcataactagtgggaagttatccaaattagaacactttgaagcagatgagaag
gtacggacaatatcattatttggtgaagtatggggcataggaccatccacagcattgaaa
ttgtatgagaagggacatcgttcattagatgatcttaggaatgatggctcacttacaaat
gcacaaaagttagggctgaaatactttgatgatatcagagaacggattccacgccatgag
gttcaggatatggaacacattttacaaaaagctggggaggaagttttacctggggttgtt
atcatctgtgggggatcatatagacgtgggaaagctacctgtggagacattgatatcata
ataacacatcccgatggacaaagtcacaaaggatttttgccaaagtttgtaaaacattta
aagcatatgaatttcctaagagaggatttaattttcagtactcacagtgaagagggttct
gattctggtgtggacacttactttggtttttgtacctatcctgggcaggagttgcgtcgt
cgtattgatttgaaggtttacccaagacagatatatgcatttggactaatagcatggaca
ggaaacgatgtgctcaataggaggttgaggttgctagcagaatctaaaggattccggctt
gacgatactgggttgtttccagccacacatggttctggcagcaaacggggtgcaaaaggt
agtgcaagtttgaaatttaatactgaaaaggaggtatttcatttcctggactttccttgg
cttgaaccacatgaaagaaatctctaa
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