Vigna radiata (mung bean): 106772870
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Entry
106772870 CDS
T04126
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106772870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106772870
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106772870
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106772870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
106772870
NCBI-ProteinID:
XP_014514973
UniProt:
A0A1S3V9F3
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Position
9:complement(217007..218576)
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AA seq
281 aa
AA seq
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MPLILPKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYD
YHYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCATDVDDDSHTCCIWQFNFREFNVNEDVF
ANDSIELLRQSGIDFKKNNEDGIDARRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKL
LTCQNLPDTQAEFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAG
SDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGAH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgattttaccgaaaagcgattcgatccagattcgcgaggtgtggaacgataac
ctggaagaggaattcgcgttgattcgcgaaatagtggacgattacccttacatagcgatg
gacacggagtttccggggatagttctccgaccggtggggaatttcaagaacagctacgat
taccattaccaaaccctaaaggacaacgtcgacatgctaaagctcatacaattggggctc
accttctcagacgagtacggcaaccttcccacgtgcgccaccgacgtcgatgacgattcc
cacacgtgctgcatctggcaattcaatttccgggagttcaacgtcaacgaggacgtcttc
gccaacgattccatcgagcttttgcgccagagcggcatcgatttcaagaagaacaacgag
gacggcatcgacgcccgccgtttcggggaacttctcatgtcgtccgggatcgttttgaat
gacaacgttcattgggttactttccatagcggttatgatttcgggtacttgttgaagctc
ttgacgtgtcagaatttgcccgatacgcaagcggagttcttcaacctcatcaacatgtat
ttccccactgtatacgacatcaagcacctcatgaaattctgcaacagccttcacggcggt
ttgaacaagcttgccgagttgttggaggtcgaaagggtcgggatttgccatcaggccggt
tccgatagtttgctcacttcatgtacattcaggaaattgaaggacaatttctttagtggc
tcgttggagaagtatgctggtgtcttgtatgggttaggtgttgagaatggacagggagcc
cattga
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