Vigna radiata (mung bean): 106774222
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Entry
106774222 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106774222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106774222
03036 Chromosome and associated proteins [BR:
vra03036
]
106774222
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106774222
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106774222
mRNA degradation factors
5'-3' decay
Decapping complex
106774222
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106774222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
NA-iREase2
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
106774222
NCBI-ProteinID:
XP_014516622
UniProt:
A0A1S3VEI4
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All DBs
Position
9:6857492..6863706
Genome browser
AA seq
496 aa
AA seq
DB search
MNHHHNNRARYPPGMGLGRGGFHPNVGHNPNLNQNPGLNQNQGFQPRPSYQQQPHYVQRH
LMQQPQQQQQWLRRDANAVDEVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATK
GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA
LEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQP
VHLLVGTPGRILDLAKKGVCIMKDCSMLVMDEADKLLSPEFQPSIEQLIHFLPSNRQILM
FSATFPVTVKDFKDRYLRKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQIN
QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFT
RGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGT
EIKQIPPQIDQAIYCR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccaccacaacaacagagcgaggtaccctcccggaatggggcttgggagagga
ggtttccatccgaacgtcggccacaaccccaacctcaaccagaaccccggcctgaaccag
aatcaggggtttcagcctcggccgtcgtaccagcaacagccacattacgtgcagaggcat
ttgatgcaacagccacagcagcagcagcagtggctgagaagagacgccaatgccgtcgac
gaggtcgaaaagaccgtgcagtctgaagccgtggattcgagttcacaagattggaaagca
agactcaagattccaccagctgatacacgctataagactgaggatgtaacagcaacaaaa
ggaaatgaatttgaggattactttttgaagcgtgagctgctcatggggatatatgagaag
ggttttgaaaggccttctcccatccaagaagaaagcattccaattgctcttactggcagt
gacattcttgctagggctaaaaatggaactggcaaaactgctgcattttgcattcctgcg
ttggaaaaaattgaccaagataataatgttattcaagttgttatattggtcccaacccga
gaactggctttgcagacttctcaagtgtgtaaagaacttggaaaacacttgaaaattcaa
gttatggttacaacaggtggtaccagcctgaaagatgatataatgcgcttatatcaacca
gttcacttactagttggaactccaggaagaatattagatcttgctaagaaaggtgtttgt
attatgaaagattgctctatgcttgttatggatgaggctgataagcttctgtccccagag
ttccaaccttctatagagcagctgattcattttcttccttcaaaccgtcaaatcttgatg
ttttcagcaacatttccggttactgtaaaggatttcaaagataggtatcttcgtaaacct
tatgtcatcaaccttatggatgaactaactttgaagggtattacgcaatattatgcattt
gtggaagagaggcagaaagtccattgcttaaatactctattttctaagctgcaaataaac
cagtctatcattttctgcaactcagtgaatcgagtagaactccttgccaagaaaatcaca
gaacttgggtattcatgtttctatattcatgcaaagatgttgcaagaccatcgtaacaga
gtgtttcatgacttccgcaatggtgcatgtcgaaatcttgtttgtactgatctttttact
agaggaatagacattcaggcagttaatgttgttattaattttgattttcccaagaactca
gagacttacttgcacagggttggtcgttcagggaggtttgggcaccttgggttggcagtg
aacttgattacttacgaggatcgctttaatttatataggattgaacaagaacttggaact
gaaataaagcagattccaccgcaaattgatcaggcaatttattgccggtaa
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