KEGG   Vigna radiata (mung bean): 106774241
Entry
106774241         CDS       T04126                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106774241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106774241
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106774241
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106774241
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 106774241
NCBI-ProteinID: XP_014516654
UniProt: A0A1S3VEU8
LinkDB
Position
9:2863360..2866062
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggccctgaggatatttacctttccacttcacttgccagctatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctcatgggaacacttcgctctttt
gatcaatttgccaatgcagttcttgagggtgcctgtgagagggttattgttggcgatctg
tattgtgacatccctttgggtctctatgtgatccgcggggaaaatgttgttctaattggt
gagctggatttggagagggaggaacttcctgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgactag

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