Vigna radiata (mung bean): 106775797
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Entry
106775797 CDS
T04126
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03020
RNA polymerase
vra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106775797
09124 Replication and repair
03420 Nucleotide excision repair
106775797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106775797
03400 DNA repair and recombination proteins [BR:
vra03400
]
106775797
Enzymes [BR:
vra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106775797
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106775797
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106775797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106775797
NCBI-ProteinID:
XP_014518479
UniProt:
A0A1S3VK62
LinkDB
All DBs
Position
10:18554242..18561769
Genome browser
AA seq
1194 aa
AA seq
DB search
MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
FASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSTKDQKKKGA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaggaacaagagtacgatcagcaaatgatggaggaagacgacgacgaa
gacgatatcacgcaagaggatgcgtgggctgttatctccgcctacttcgaagagaaaggc
ctcgttcgtcagcaactcgattctttcgacgagttcatccaaaacactatgcaggaaatc
gtcgacgaatccgccgacatagaaattcgacccgagtcgcagcataatcccggtcaccaa
tctgatttcgccgagactatttacagaatcagctttggccagatttatttgagtaagccc
atgatgacggagtctgatggagaaaccgccacgttgtttcccaaggctgctaggttaagg
aacctcacctactcagctcctttgtatgttgatgtctccaagagggtcatcaagaagggg
cacgatggtgaagaagtcaccgagactcaagatttcactaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccaaaattcggagaaggatttgact
gaacttggagagtgtccatatgatcaaggcggatatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgtgttcaagaagaggcag
ccgaacaagtatgcctttgtggctgaagttcggtcaatggctgagtctcagaacagacca
cctagtactatgtttgtgcgcatgctctctcggactagttccaaagggggttcttcagga
caatatatacgtgccacacttccttatattcgaactgaaattcccatcattattgtgttt
cgagcgttggggtttgttgctgacaaagatatactcgaacatatatgctacgatttctca
gatactcaaatgatggaattgcttcgtccttccctagaagaagcgtttgttattcaaaat
caacaagttgcacttgactacattgggaaaagaggtgcaactgttggtgtaactaaggaa
aagagaatcaagtatgctaaggagatcctccaaaaggagatgctccctcatgtgggtgtt
ggagagtattgtgagaccaagaaagcatactattttggatatatcattcaccggctactt
ctgtgtgcacttgggcggagggctgaggatgatagggatcattacggcaacaaaaggctg
gatctggctggccctctacttgggggcctttttcgaatgctattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctacaattt
gctattaaagcaaaaaccattacaagtggacttaaatactcactagctaccggtaattgg
ggacaagcaaatgctgcagggactagagctggagtttcacaggtgctgaatcgtttaact
tttgcatcaactttatctcacttgcgaagactaaattccccaataggacgagaagggaag
ttggctaaaccaagacagctgcataattctcaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcctgtggacttgtgaagaatctggcattgatggtctacataaccgtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcactgagaatttcgag
gaaatttctcctgcggtgattccccaagctactaagatttttgttaatggttgctggatg
ggtatccatcgtgaccctgatatgttggtgagaactttgaggaagttgagacgtcgggtt
gatgttaatactgaagttggggttgtcagagatatccgtcttaaagaattgcgaatatat
actgattatggtcgctgcagtcgtcctttattcattgtggataagcaaaggcttctcata
aagaagagggatattcatgctttacaacagagggaatcccctgaagagggtggatggcat
gatctagtgtccaagggctttatagaatatattgacacggaagaagaagagactacaatg
atttccatgacaattaatgatcttgttcaagctaggctcaacccggaagaggcatattct
gatacatacactcattgtgaaatccacccatcactgattttgggtgtgtgtgcttctatc
ataccatttcccgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaaa
caagcaatgggaatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggttactacaagagccatggaacatcttcatttccgc
caactccctgctggaattaatgccattgtggccatatcctgttattctggttataatcaa
gaagattctgtcatcatgaaccaatcatcaatagaccgaggattctttcgatctctattt
ttccgatcatatagagatgaagagaagaagatgggaactctagtcaaagaagattttggc
cgaccagatagaactaacaccatgggcatgagacatggttcttatgataagctggatgat
gatggtcttgcaccaccgggcacaagagtatctggtgaggatgttattatcggaaagacc
accccaatatctcaggaagaggcacagggacaagctttacgttacacgaggcgtgatcac
agcataagcttacgtcacagtgaaactggaatggttgatcaagttctgctgactacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgcataccacagattggt
gacaaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagag
gacatgccctggactgtggaaggcatcacccctgatattattgtcaatccacatgctatt
ccatcccgaatgacaattggtcagcttattgagtgtatcatgggtaaggtggccgctcac
atgggaaaggaaggagatgcaactccttttacagatgttactgtggataatatcagcaaa
gctctgcacaaatgtggttaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctgagtgcaatgattttccttggtcctacatattaccaaagactgaagcat
atggttgatgacaagatccattctcgtggacgtggtcctgtgcagatcctcacaaggcaa
cctgctgagggacgctcacgcgatggaggtctccgatttggagagatggaacgagactgc
atgattgctcatggagctgctcacttcctaaaggagagattgtttgatcaaagtgatgca
tacagggtccatgtgtgtgagcgctgtgggttgatagccattgcaaatctcaagaagaat
tctttcgagtgcagggggtgtaagaacaaaacggacattgttcaggtttacattccttac
gcgtgtaagttgctcttccaagagttaatggctatggccatagcgccaagaatgcttacg
aaggagatcaaatctacaaaagaccaaaagaagaaaggagcctga
DBGET
integrated database retrieval system
