Vigna radiata (mung bean): 106775850
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Entry
106775850 CDS
T04126
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106775850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106775850
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106775850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_DCAF4
Ge1_WD40
Cytochrom_D1
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Beta-prop_VPS8
Mito_carr
Motif
Other DBs
NCBI-GeneID:
106775850
NCBI-ProteinID:
XP_014518562
UniProt:
A0A1S3VK20
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Position
2:complement(24005221..24009882)
Genome browser
AA seq
425 aa
AA seq
DB search
MDSSNSEQAVLDGKLYRHLNSLIVAHLRDNNLTQAASVVASATMTPLNVEAPPNRLLDLV
SKGLAAEKGDVTRGTDFSASLPLPHTAAIDFSTAPDMKGSSKSFPKHETRHLSEHKNIAR
CARFSADGRFVATGSADTSIKLFEVSKIKQMLLPEAKDGPVRPVIRTYYDHIQPINDLDF
HPQGTILISGAKDQTIKFFDISKTNAKRAYRVIQDTHNVRSVSFHPSGDFLLAGTDHAIP
HLYDINTFQCYLSSNIPETSPSGAINQVRYSCTGAMYVTASKDGAIRLWDGITANCVRSI
TAAHGTAEATSAIFTKDQRFVLSSGKDSTVKLWEVGSGRLVRQYLGAIHTQLRCQAIFNQ
TEEFIIFIDELSNEIVIWDAMTTEKVAKWPSNHVGAPRWLEHSPVESAFISCGTDRSVRF
WKETV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatagcagtaactcggaacaggccgtgcttgatggaaaactctacagacacctcaat
tctctcatcgtcgcacatcttcgggacaacaatctcacccaggctgcaagtgttgttgct
tcagcaaccatgactccactgaatgtggaagccccacctaacaggcttctcgacctggtt
tctaagggtcttgcagcggaaaagggcgacgtcacgagaggcactgatttctctgcctca
ctgcccctacctcacacagcagctattgatttcagcactgcgcctgatatgaaaggttcc
tcaaagagcttcccgaagcatgaaacgcggcacctttcggaacacaagaatattgccaga
tgtgctaggtttagtgctgatggaaggtttgttgccactggaagtgccgatacttcaata
aagctatttgaggtttcaaagatcaagcagatgttgctgccagaggcaaaggatggtcct
gtgcggcctgtcattcgaacatattatgatcatatacaaccaataaatgatctggatttt
catccacaaggtactatcctgatttctggagccaaagatcaaacaataaagttttttgat
atttcaaaaacgaatgcaaagagagcatacagggttatccaggacacacacaatgttcga
tctgtatctttccatccatctggggactttctgctggcaggaactgatcatgcaattcca
catttgtatgatataaatacctttcagtgttatctgtcatcaaatatcccagagaccagc
cctagtggagccataaaccaggtcagatattcttgtacaggtgccatgtatgttacagca
tctaaagatggtgctattaggttatgggatggcatcacagccaattgtgtgcggtcaata
actgcagcacacggaacagctgaggctaccagtgcaatttttaccaaagatcaaaggttt
gttctctcctccgggaaggattctaccgtaaagctttgggaagtcggctctggaagatta
gtcagacaatatcttggagctatacatacccagctaaggtgtcaggctatttttaatcag
acagaagaatttattatattcatagatgaactgagcaatgagatcgttatctgggatgca
atgacgacagaaaaagttgcaaagtggccttctaatcatgttggtgcaccccgctggctt
gaacactcaccagtcgagtcagcttttatttcctgtggaactgataggtcagttcggttc
tggaaggagactgtataa
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