Vigna radiata (mung bean): 106776018
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Entry
106776018 CDS
T04126
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106776018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106776018
03009 Ribosome biogenesis [BR:
vra03009
]
106776018
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106776018
Spliceosome [BR:
vra03041
]
Complex A
U1 snRNP components
U1 related factors
106776018
Complex B
106776018
Ribosome biogenesis [BR:
vra03009
]
Eukaryotic type
Pre-60S particles
Helicases
106776018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
DUF58
Motif
Other DBs
NCBI-GeneID:
106776018
NCBI-ProteinID:
XP_014518797
UniProt:
A0A1S3VKQ5
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All DBs
Position
10:10084246..10093246
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AA seq
574 aa
AA seq
DB search
MSYVPPHLRNNGSATVATARTPSVTLDNNNHHHHNLNNHHKLAFTSNNNNTTNANGSPSL
PSFHNASRWSSAAPPSPRIFATPDPVFPQWQPSERASRMTPEQIEEVRSRLNLDVTVASD
SPPAPAPIESFTDMCLHSSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKT
AAFTIPMIQHCLAQPSIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGG
TNIEKQRAELRAGIEIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIRE
VMRSLPEKHQTLLFSATMPVEIEALAKEYLASSVQVKVGKVSSPTTNVSQTLVKISENEK
IDRLLDLLVEDASQAEKCGHPFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGRSQSE
REAALHDFRSGSTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTG
LATSFYTDRDMFLVANIRKAIADAESGNTLTFATGKVARRKEKEAAAAQKEANIALSKQL
GLGAASINIEDKYKFMITAANIKREGAADSAWDD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccgcacctccgaaataacggctccgccaccgtcgccaccgccaga
accccctccgtaaccctagacaacaacaaccaccaccaccacaaccttaacaaccaccac
aagcttgcattcacctccaacaacaacaacaccaccaacgccaatggctctccctcgctc
ccctccttccacaatgcctctcgctggagctccgccgcacctccgtcgccgaggattttc
gccacacctgaccccgtcttcccgcaatggcaaccctctgaacgcgcttcgcgcatgact
ccggagcagattgaagaggtccgttcccggcttaatcttgatgttactgttgcatctgat
tctcctcctgcacctgcaccaatagaatcgtttactgatatgtgtttgcactcaagtatc
atgaaggatattgcttaccatgaatacaccaggccaacttcgatccaggcacaagccatg
ccaattgctctcagtggaagggatctattgggttgtgctgaaactggaagtggaaagact
gcagctttcacaattcctatgatacagcattgcttagcccaaccttcaattcggcgcaat
gatggtcctctggcattagttttggctcctaccagagaactcgctcaacaaatagaaaag
gaggttaaagcttttagcagatccctcgagtcattaaaaactgctattgttgtgggcgga
acaaacattgaaaagcagagggcagaacttagagcagggattgaaatagcagttgccacg
ccaggaagattcattgatcacttgcaacaaggcaatacttccctctctagaatttctttt
gttgttctagacgaagcagatagaatgctggatatgggttttgaaccacagataagagag
gtaatgagaagtcttcctgagaagcatcaaacattgctttttagtgcaacaatgcctgtg
gagattgaagcattagcaaaggagtacttggctagttcggtgcaagtgaaagtggggaaa
gtgagtagcccaacaactaatgtttcacaaacgcttgtgaaaatttctgaaaacgagaag
attgaccgacttctagacttacttgtagaggatgcatcacaggctgaaaaatgtggtcat
ccatttccattaacaattgtgtttgttgagaggaagacaaggtgcgatgaagttgctgaa
gcattggtagctcaaggattatctgcagtttctcttcatggtggtcgcagtcagagtgaa
agagaggctgccttgcatgattttcggagtggctctaccaacattttggttgctactgat
gttgcatctcgtggcttggatgtcactggagtgtcccatgtcatcaatctagatcttccc
aagaccatggaagattatgtgcaccggattggaaggacggggcgtgcaggatcaactgga
ttagctacttcattttacactgatcgtgacatgttccttgttgcaaatataaggaaggca
atagctgacgccgaatctgggaacacgctgacatttgcaaccggaaaggttgctagacgg
aaggagaaagaagctgcagctgcacaaaaagaggcaaatattgctttatccaaacagtta
ggattgggagctgcttcaattaacatcgaagataaatataaattcatgattactgccgca
aacattaaaagagagggcgcagcagatagtgcctgggacgattaa
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