Vigna radiata (mung bean): 106776266
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Entry
106776266 CDS
T04126
Name
(RefSeq) uncharacterized protein LOC106776266 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106776266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106776266
03400 DNA repair and recombination proteins [BR:
vra03400
]
106776266
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106776266
Messenger RNA biogenesis [BR:
vra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
106776266
DNA repair and recombination proteins [BR:
vra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
106776266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
106776266
NCBI-ProteinID:
XP_014519149
UniProt:
A0A1S3VM35
LinkDB
All DBs
Position
10:10557396..10567594
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AA seq
917 aa
AA seq
DB search
METVPSVLKKYFGFSHFRPYQREVIEKIIERRDCLVVMATGSGKSLCYQVPPLVVKKTGI
VVSPLISLMQDQVMALKQRGIRAEYLGSAQKDFTVHSKAERGQFDILFMTPEKACTVPTS
FWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLVDVPFVGLTATATEKVRF
DIISSLKMDNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREITKEVATGGSTIIYCTT
IKDVEQVFKSFTEAGIEAGMYHGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKPNI
RQVIHYGCPKSLESYCQESGRCGRDGIASVCWLYYTRSDFAKGDFYCGDVKSEKQRKAVM
ESLLAAERYCVLTTCRRKFLLEYFGEKISADRCGNCDNCKVSKKERDMSREAFLLMACIH
SCNGRWGLNMPIDVLRGSRAKKILEVQFDKLPLHGLGKNYPANWWKSLGHQLISQGYLKE
TVSDVYRTISVSSRGEQFLASSRPDYQPPLVLTLTAEMLGEEDNGNTQDEFITLSTSELD
GFSEAERKLHQMLLEERLELARSVGTAPYAICGDQTIRKIALTRPSTKARLANINGVNQH
LVMKYGDHFLQVIQKLSQGLNLSLDGEERVSTASLQTNAVMKVSPITNKSKKLTSAKFEA
WKMWHEDGLSIHDIANLEVRSAPIKEQTVVEYLLEAAQEGLPFDWVRFSKMIGLTQEIMS
EIQGAISKVGSTDKLKPIKNELPEDISYQHIKTYLSMQNCGISLETNQYGSNQTGKDDEL
AHNASNLSDCTLETCPDRQCEDDTSVKALAEERDLEMDEVPSLPVNGSEEEKLSNAREGK
FTRKRQRVSETKEVNSTRLKATVTSVIEWMKNLDEGATLSNILEHFNGSSEDSVVELLNC
LECDFLIYRKGNVYRVL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagacngttccctctgttctcaagaaatactttgggttttctcattttcggccttat
cagagagaagtcattgagaaaattatcgagagaagggattgtttggtagtcatggctact
ggtagtgggaagtccttgtgctatcaggtaccncccttggttgttaaaaagactgggata
gttgtgagccctctgatatcgttgatgcaagaccaggtgatggctttaaaacaacgaggt
attagagctgaatatcttggaagtgctcagaaggatttcactgtgcattctaaagccgaa
cgtggtcaatttgacattctgttcatgactcctgagaaggcatgcacagttcctaccagt
ttctggtccaacttactaaaggctggaattagtctttttgctgttgatgaagcccattgc
atatcagaatggggacatgattttagggtggaatacaagcatttagacaagttacgtgag
gtcttggttgatgttccttttgttggtctaactgcgactgctacggaaaaggttcgattt
gacattatcagttccctgaagatggataacccttatgttacgattggttcatttgatcgc
acaaatcttttctatggtgtcaaactattgaaccgtggacaatcttttattgatgagctt
gtgcgggaaattacaaaagaagttgctactggtggttcaactataatttattgtacaaca
atcaaagatgtagagcaggtattcaagtcatttacagaagcaggcattgaggcaggaatg
taccatggccaaatgaatggaaaagctcgagaggagtctcatagattatttgttagagat
gaactgcaagtcatggtggccaccattgcctttggcatgggcatagataaacctaacatt
agacaagtgattcactatggttgccctaaaagtctagaatcctactgccaggaaagtgga
cgatgcggtagagatggtatagcttctgtttgttggctttattacacaagaagtgacttt
gcaaagggcgacttttactgtggagatgtaaaatcagaaaaacaaagaaaagctgttatg
gagtcattgcttgcagctgaacgctattgtgtgctgacaacttgcagaagaaagttcttg
cttgaatactttggggaaaaaatttcagctgatagatgcgggaactgtgataattgcaaa
gtctcaaagaaggagcgagacatgtcaagggaagcatttcttctaatggcttgcattcat
tcatgcaacggcagatggggccttaatatgcctattgatgtcctgcgcgggtctcgagcc
aagaaaattcttgaggttcaatttgataagcttccacttcatgggctggggaaaaattat
ccagcaaattggtggaaatcacttgggcatcaattgatttctcaaggttatctgaaggag
actgttagtgacgtatacagaactataagtgtcagttcaagaggagagcagtttttggcc
tcttcaagaccagattatcaacctcctttagttttgacattgactgctgaaatgcttgga
gaagaagataatggaaacacacaagacgaatttataactttatccacttcagaattagat
ggtttttcagaggctgagagaaagctgcatcaaatgcttttggaagaaagattagagctt
gcaagaagtgttggaacagctccatatgctatctgtggagatcaaacgatcaggaaaatt
gctttgacaagaccatctacaaaagcaagactagcaaacattaatggtgtgaatcagcac
ctagtgatgaaatatggagatcattttcttcaagttattcagaaactgtcacaaggacta
aacctatcattggacggggaagaaagggtctcaacggctagtttgcaaactaatgcagta
atgaaagtgtctccaataaccaacaaatccaagaagttgacttcagcgaagtttgaagca
tggaaaatgtggcatgaagatggtctttctattcatgatattgctaacttagaagttaga
tcggctcctataaaagaacaaactgttgttgaatatctactggaagctgcccaagaagga
ttaccttttgattgggttagattcagcaagatgataggactcactcaagagattatgtca
gaaattcagggtgctatttcaaaagttggatctacagacaagctgaagcctataaaaaat
gaattgccagaagatataagttatcagcacatcaagacttatttgtcaatgcaaaactgt
ggtatatccttggaaacaaatcagtatggaagtaaccaaaccgggaaagatgatgaactt
gcacacaatgcttcaaatttgtcagactgtactttagaaacatgtcctgacaggcaatgt
gaagatgacacttctgtaaaagctttggctgaagaacgtgacttagaaatggatgaggta
ccttctttacctgtcaacggttccgaggaagagaagctttcaaatgccagggaagggaaa
ttcacaagaaaacgacaaagggtcagtgaaacgaaggaagtaaactcaactagactgaag
gctacagtgacttctgttatagagtggatgaagaaccttgatgaaggggctacgttgagc
aatattttggaacacttcaatggatccagtgaagattctgtggttgaactgctcaattgc
ttagagtgtgactttttaatatataggaaagggaacgtgtacagggttttgtaa
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