Vigna radiata (mung bean): 106776287
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Entry
106776287 CDS
T04126
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106776287
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106776287
Spliceosome [BR:
vra03041
]
Complex C
Other components
Complex C specific factors
106776287
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_19
AAA_30
AAA_7
Cas3-like_C_2
nSTAND3
AAA_23
ResIII
AAA_29
AAA_11
Motif
Other DBs
NCBI-GeneID:
106776287
NCBI-ProteinID:
XP_014519174
UniProt:
A0A1S3VM62
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All DBs
Position
10:complement(18000497..18011192)
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AA seq
699 aa
AA seq
DB search
MSQFWKPGTERPQGRVVDDEEGGLLFLFGSHHSSSARHGYASIEKQRQRLPVSKYRTAIL
YLVETHATTIIVGETGSGKTTQIPQYLKEAGWATGGRLIACTQPRRLAVQAVASRVAEEM
GVKLGEEVGYTIRFEDVTKPDVTVLKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIS
TDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFRMRKKRREIENKDHGPQVEPAILS
VEGRGFNVQINYAEEPVQDYVQAAVSTTLLIHEREPAGDVLVFLTGQDDIDAAVQLLTDQ
VQTTGKHSSGLIVLPLYSGLPRADQELVFSQAPRGKRKVVISTNIAETSLTLEGIVYVVD
SGFSKQRFYNPISDIENLVVAPISRASARQRAGRAGRVRPGKCYRLYTEEYFLNHMPNAG
IPEIQRSNMVSCVIQLKALGIDNILGFDWPASPSAEAMIRALEVLYSLGILDDDAKLTSP
TGFQVAEIPLDPMVSKMIIASSQLGCSEEIITIAAVLSVQSIWISGRGIQKESDEAKLRF
AAAEGDHVTFLNVYKGFHQSGKSSQWCHKNYVNYHAMRKVLEVREQLKRIAKRIGLVLKS
CESDMQLVRKAVIAGFFANACHLEAYSHDGMYKTLRGSQEVYIHPSSVLFRVNPKWVIYH
SLVSTDRQYMRNVLTIDPSCLLDVAPHFYKLQQSNHLLF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttctggaaacccgggacggagaggccacagggtcgcgtagtcgacgatgaa
gaaggtggtcttctcttcttgtttggttctcaccattcctcttccgcaagacatggctac
gccagcatcgagaagcaacgccagcgattgcctgtgtccaagtaccgcaccgccattctc
tacctcgtcgagactcacgccacaaccatcatcgttggcgaaaccggcagcggaaaaacc
actcaaattcctcagtacctgaaagaagcaggttgggccaccggtggcagactcattgct
tgcactcaacctagaagacttgccgttcaggctgttgcttccagagttgccgaagagatg
ggagtaaagctcggtgaagaagttggttacacgataaggtttgaagatgtaaccaaaccg
gatgtaacagtacttaaatttttaactgatggagtgctcctaagggagatgatggacgat
cctcttttgaccaaatatagtgttataatggtggatgaggctcatgaaagatcaatatca
acagacattttgcttggactattgaaaaagattcaacgtcgtcgaccagagttgcggttg
attatctcatctgctactattgaagcaaagtcgatgtctgacttcttccgcatgagaaag
aagcgccgagagattgaaaacaaggatcatggaccacaagtggaacctgcaatcttgtca
gttgagggtagaggattcaatgtacaaattaattatgctgaggaacctgtccaagactac
gttcaggctgctgtttcaacgacactcttgatccatgagcgggagccagcaggagacgtt
ctagtgttccttactggccaagatgacattgatgcagctgttcagttactcactgaccaa
gttcaaactactggaaaacactcttctggattgattgttttgcctctgtattcagggctt
ccacgtgctgatcaggagttagtgttttctcaagctcctcgtggaaagaggaaagtagta
atttctactaatatagcagaaacatcactcacattagagggaattgtctatgttgttgac
agtgggttttctaaacagcggttctacaatccgatttctgatattgaaaatctggttgtg
gctccaatatctagggcttctgctagacaaagagctggtagggctgggcgagttcgacca
ggaaagtgttacaggctatacacagaagaatattttcttaaccacatgcctaatgcggga
attccagagatacagagatcaaatatggtctcctgtgtaatccagctaaaggccttgggg
attgataatatcttgggctttgactggccagcatctccctctgctgaagcaatgatccga
gcactagaagttctctactcacttggtatactggatgatgatgctaagctgacttcaccg
actggatttcaagttgctgagattccacttgatccgatggtctcaaaaatgataatagct
tccagtcaacttgggtgttcagaggagataatcaccattgctgctgttctttctgtccaa
tctatctggatctcagggagagggatacaaaaggaatctgatgaagcaaaattgagattt
gctgctgccgagggtgaccatgtaacattccttaatgtatacaagggatttcatcaatct
ggtaaatcttcacagtggtgtcacaagaactatgtaaactatcatgccatgagaaaggtt
cttgaagttagagagcaactcaaaagaattgcaaagaggataggactagtcttgaaatct
tgtgagagtgatatgcagttagtgagaaaagctgtcatcgccggattttttgcaaatgcg
tgtcatctagaggcatacagtcatgatgggatgtataagacgttaagaggatcacaggag
gtttatattcacccatcgtcagtgctattcagagtaaatccaaaatgggttatttaccat
tctcttgtatcaactgatcgacaatacatgcgtaatgtcttaactatagacccctcgtgc
ttactggatgttgctcctcacttctacaagttgcaacaatctaatcatctccttttttga
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